Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2873g00001 ATGCTAAACACGGGGAAAGAAACAGAGGTGTTTCGTTCAGCGGTTTTGCCCGGGTTCCCGTACTGGAAGGCTATCCGTCGCCGTTTCGGCCCGGACTCTCCTTTCTTTGCTTCCGGTAATATCGAACGGGAACTTCTTGCTAAACAGATTGCCTTGGAATTAACTGCGGAAGAGAAGCAACAGCTTTTTGTACCAGATGAATACAGGAAAGTCCCCTGTCCCATTGTTGGTTGTGGAGCATGCTTGACTTCCTTGGAGGAATTTGAGAATCATTATAATGCACGGCATACTGCCTCTTGTTCAGTGTGTTCTAGAGTCTACCCGACATCTCGCTTGCTAAGCATACATGTTTCTGAAGTGCATGATTCGTTCTTTCAAGCAAAGGCTGCTCGGGGCTATGATGTGTATGAATGCCTAGTGGAAGGCTGTGGTTTAAAGTTTAAAAACTACAAGAGTAGGCAACAGCACCTCATTGACAAGCATAAGTTCCCCACTTCCTTTGAGTTTCTAAAGAAGGCTCGACCATCAAAGAAACAAAGGCAGAAGATTCAACGGAAACAAGATCCGCAAAAGGAGAATGATTCAAGAACAATGGAAGTGGATAATGCAACCATGGATGGCCTTGTGACGGCAGTCTCTAAATTGAGTACTTCGGACTCAACTCCATCATCTGTCAGCTTTGGTCGCCGGCACACTCGTGGTTTGACATTTGTCCCTAGAGCTGTTCAGCGTGAAGCCGGATCAAACGCTGCATCACCTAGAAGAAAGCAGTGA 774 0.4638 MLNTGKETEVFRSAVLPGFPYWKAIRRRFGPDSPFFASGNIERELLAKQIALELTAEEKQQLFVPDEYRKVPCPIVGCGACLTSLEEFENHYNARHTASCSVCSRVYPTSRLLSIHVSEVHDSFFQAKAARGYDVYECLVEGCGLKFKNYKSRQQHLIDKHKFPTSFEFLKKARPSKKQRQKIQRKQDPQKENDSRTMEVDNATMDGLVTAVSKLSTSDSTPSSVSFGRRHTRGLTFVPRAVQREAGSNAASPRRKQ 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2873g00001 257 PANTHER UNCHARACTERIZED 17 245 IPR039258 -
Pral2873g00001 257 ProSitePatterns Zinc finger C2H2 type domain signature. 138 161 IPR013087 -
Pral2873g00001 257 ProSitePatterns Zinc finger C2H2 type domain signature. 73 96 IPR013087 -
Pral2873g00001 257 SMART c2h2final6 98 121 IPR013087 -
Pral2873g00001 257 SMART c2h2final6 136 161 IPR013087 -
Pral2873g00001 257 SMART c2h2final6 71 96 IPR013087 -
Pral2873g00001 257 MobiDBLite consensus disorder prediction 182 199 - -
Pral2873g00001 257 MobiDBLite consensus disorder prediction 209 230 - -
Pral2873g00001 257 ProSitePatterns Zinc finger C2H2 type domain signature. 100 121 IPR013087 -
Pral2873g00001 257 MobiDBLite consensus disorder prediction 170 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2873g00001 Pral-Chr2873 3654 6701 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2873g00001 18 252 C2H2 Transcription Factor Family AT5G14140 67.347 1.10e-118 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral2873g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2873g00001 - - pvy:116145577 357.836