Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2872g00007 ATGGAAGACAAACAGCCACCACAATCCGCCCTTGTTCATGACCCTCCTCCTCCTCCTCCTCCGTCTATCCCCAGTCATCATGATCATATTGATCCCGTCAAAGAAGAATCCCCCAGAAAACCCGTCACCGGCGGCGGCGCCGGTGGAGATAGGTTGAAGAGAGATGAGTGGAGTGAAGGAGCTGTGTCGACGCTTTTGGAGGCGTACGAAGCCAAATGGGTGCTCCGGAACAGAGCCAAGCTCAAGGGCCATGATTGGGAGGACGTCGCCAGGTACGTGTCTTCACGCGCCAACTGTACCAAGTCTGCTAAGACTCAGACTCAGTGCAAGAACAAGATCGAGTCGATGAAGAAACGGTACCGTTCCGAGTCGGCGTCCGGGGATGCATCATCGTCTTGGCCGCTGTATTCGCGTCTTGATCTTCTGCTCCGTGGGACTGGGCCTACTGCGTCCACCACGACGATGGCTGTGCCGCTTGCCGCGGCCGCGGCGGCACCGTCTCAGGTGACTCACCACGGCAATAACCAGGGTTTTGTGTTGTTGGAGCCTCCGTTGGCGGTGGCTCAGCTACCTCATCAACTACAGCCGCCTCCGGTGGCCGTCGCCGCTCCTCCTCCGATAGCCAACGCTCAAAACTCTCACGGATCCAACGGTATTGACAGGTTAGCCAAGGAAGATGGATTAGGGACGAACAAATCATCAGATCAAGTGTCCAACAAGAACATGAATGCAACTCTGGACACAGATAGCAGCACACCAGCCCTGTATAGCCATTCAAAGGATCACCCAACAAGAAGTAACAACAACAACAACAAGCGGAAGAAGAAGATGGATCATCGAAGCAACATGAAGAAGATGAAGAGAAAGAGCGCAGAAGGGAAGTTTAATGAGATGGGAATAGCAGAGAGCATAAGGTGGCTTGCAGAGGTAGTGGTGAGATCAGAGCAGGCGAGGATGGAGATGATGAAGGAGATCGAGAAGATGAGGGTTGAAGCAGAGGCCAAGAGAGGAGAAATGGATCTTAAAAGAACTGAGATCATTGCTAATACCCAGCTAGAGATTGCTAGGATCTTTGCAAGTGTCAATAATAATAAAGGTGTTGATTCCTCACTAAGAATTGGTAGGAGTTAA 1131 0.519 MEDKQPPQSALVHDPPPPPPPSIPSHHDHIDPVKEESPRKPVTGGGAGGDRLKRDEWSEGAVSTLLEAYEAKWVLRNRAKLKGHDWEDVARYVSSRANCTKSAKTQTQCKNKIESMKKRYRSESASGDASSSWPLYSRLDLLLRGTGPTASTTTMAVPLAAAAAAPSQVTHHGNNQGFVLLEPPLAVAQLPHQLQPPPVAVAAPPPIANAQNSHGSNGIDRLAKEDGLGTNKSSDQVSNKNMNATLDTDSSTPALYSHSKDHPTRSNNNNNKRKKKMDHRSNMKKMKRKSAEGKFNEMGIAESIRWLAEVVVRSEQARMEMMKEIEKMRVEAEAKRGEMDLKRTEIIANTQLEIARIFASVNNNKGVDSSLRIGRS 376
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral2872g00007 376 Gene3D - 57 122 - -
Pral2872g00007 376 FunFam Trihelix transcription factor ASIL2 57 122 - -
Pral2872g00007 376 Coils Coil 318 338 - -
Pral2872g00007 376 MobiDBLite consensus disorder prediction 269 287 - -
Pral2872g00007 376 MobiDBLite consensus disorder prediction 196 292 - -
Pral2872g00007 376 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 25 361 IPR044823 -
Pral2872g00007 376 Coils Coil 269 289 - -
Pral2872g00007 376 Pfam Myb/SANT-like DNA-binding domain 54 141 IPR044822 -
Pral2872g00007 376 MobiDBLite consensus disorder prediction 10 26 - -
Pral2872g00007 376 MobiDBLite consensus disorder prediction 229 264 - -
Pral2872g00007 376 MobiDBLite consensus disorder prediction 1 56 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral2872g00007 Pral-Chr2872 81829 84945 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2872g00007 40 209 Trihelix Transcription Factor Family AT3G14180 32.571 1.06e-17 82.4
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pral2872g00007 Myb_DNA-bind_4 2.8e-19 CL0123
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2872g00007 - - gmx:100799917 375.17