Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2870g00006 ATGGCTGCCACCGCCACGTCCGCCGCCACCTCTTACTTCTTCGGCACGCGTCTCACCACCAACAATCCCGCCTCTGACTCCGGCAGATTCCACGCCCTGCTTAAGTTTGGTACCAAAAAGAAGGCCGCCCCGCCTCCTCCGCCCCCCAAAAGGGCGCCATCCAATACCAAACCATCCGGAGACCGGCTCGTGTGGTTCCCCGGTGCCAAACCACCGGAATGGCTCGACGGAACCATGGTGGGAGACCGCGGGTTCGACCCATTTGGGCTCGGGAAACCTGCGGAGTATTTGCAGTTCGACCTGGACTCGCTGGACCAGAATCTGGCTAAGAATGAGGCCGGAGATGTGATCGGAACAAGAGTGGAGACCACAGAGGTTAAACCAACGCCGTTCCAGCCGTACACGGAGGTGTTCGGGTTGCAGAGGTTCCGCGAGTGTGAGGTGATCCATGGAAGGTGGGCAATGCTGGGAGCACTGGGTGCCTTGGCCGTTGAGGCATTTACTGGAGTCGCATGGCAAGACGCTGGAAAGGTAGAGCTGGTGGAAGGGGCATCCTATCTCGGGCTTCCTCTTCCATTCTCATTGACTACACTGATCTGGATTGAGGTGATATTGATAGGCTACATTGAGTTCCAAAGAAATGCAGAACTTGACCCAGAGAAGAGGATATACCCAGGTGGCAAGTTCTTCGATCCCCTCGGCTTGGCCAACGACCCAGAAGAGAGGGCCAGACTTCAACTCGCAGAGATCAAGCACTCCAGGTTAGCCATGGTGGTTTTCCTCATCTTTGCAATTCAAGCTGCTGTTACAGGGAAAGGTCCCATCGCTTTCATTGCTACCTTTAACAAGTGA 852 0.5563 MAATATSAATSYFFGTRLTTNNPASDSGRFHALLKFGTKKKAAPPPPPPKRAPSNTKPSGDRLVWFPGAKPPEWLDGTMVGDRGFDPFGLGKPAEYLQFDLDSLDQNLAKNEAGDVIGTRVETTEVKPTPFQPYTEVFGLQRFRECEVIHGRWAMLGALGALAVEAFTGVAWQDAGKVELVEGASYLGLPLPFSLTTLIWIEVILIGYIEFQRNAELDPEKRIYPGGKFFDPLGLANDPEERARLQLAEIKHSRLAMVVFLIFAIQAAVTGKGPIAFIATFNK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2870g00006 283 Gene3D Chlorophyll a/b binding protein domain 64 283 - -
Pral2870g00006 283 MobiDBLite consensus disorder prediction 35 61 - -
Pral2870g00006 283 Pfam Chlorophyll A-B binding protein 71 267 IPR022796 -
Pral2870g00006 283 SUPERFAMILY Chlorophyll a-b binding protein 59 280 - -
Pral2870g00006 283 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 19 279 IPR001344 GO:0009765|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2870g00006 Pral-Chr2870 48040 50379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2870g00006 13 280 Chloroplast and Mitochondria Gene Families AT3G08940 70.149 1.75e-133 377
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2870g00006 K08915 - gmx:100794604 471.855