Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2867g00001 ATGGGCAGAGCTCCTTGTTGCGACAAGGCAAATGTTAAGAAAGGGCCATGGTCTCCTGAAGAAGATGCGAAGCTAAAGGAGTATATGGAGAAACATGGGACTGGTGGTAACTGGATTGCTCTCCCGCAGAAAGCTGGTTTGAAAAGATGTGGGAAGAGTTGCAGATTAAGATGGCTTAACTATCTCAGACCCAACATTAAACACGGCCAGTTCTCTGAGGATGAAGATAGAATCATATGCAGCCTCTTCGCTAGCTTTGGAAGCAGGTGGTCGGTAATAGCAGCTCATTTACCTGGGAGGACCGACAACGATATCAAGAATTACTGGAACACCAAACTTAAGAAGAAAATGATGCTTATGAATCCTTCAGTTCAGGGGAATAAGCCTCGTCATAACCAATCTACCCTTTTAACCATTCTTCAAAATTCCGTACCAGCTTCGCTGTTGTCATTCTCAGACTCTCACCACCACCACCATGCTAACGTGTCTTTCACAGGCTCTTCCAATCTTTTGAGAGGCAACCCTTCTGCTTCTAACTTCAATTTTCAACCCCAGGATAATACTTTCATGGCACCCATTCACAGCCAGCCAGTATCCATGGTTGGTGGTGAGGCTGCTAGTTGTAGCTCTTCTGATGGGAGCTGCAACAACCAGGCCACTCATATCAAAGAAGCAGAGTTTGTGTACGGAAGAGATGGGACTCTAATCCAACAGGTTGGTGGCGCGCATAATTATTATCTCACCAATGGATTGTGGGAAGAGAGTTCATTAGATTATGGGATGGATGAGATTAAACAATTAGCAAGCGCAGATAGTTGCAGCAATTTGTTTTCCGATGAGAAGAAGACAGGGGAGAGGATTGTGTACTACTGA 873 0.449 MGRAPCCDKANVKKGPWSPEEDAKLKEYMEKHGTGGNWIALPQKAGLKRCGKSCRLRWLNYLRPNIKHGQFSEDEDRIICSLFASFGSRWSVIAAHLPGRTDNDIKNYWNTKLKKKMMLMNPSVQGNKPRHNQSTLLTILQNSVPASLLSFSDSHHHHHANVSFTGSSNLLRGNPSASNFNFQPQDNTFMAPIHSQPVSMVGGEAASCSSSDGSCNNQATHIKEAEFVYGRDGTLIQQVGGAHNYYLTNGLWEESSLDYGMDEIKQLASADSCSNLFSDEKKTGERIVYY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2867g00001 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pral2867g00001 290 CDD SANT 71 113 IPR001005 -
Pral2867g00001 290 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Pral2867g00001 290 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pral2867g00001 290 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Pral2867g00001 290 SMART sant 67 115 IPR001005 -
Pral2867g00001 290 SMART sant 13 64 IPR001005 -
Pral2867g00001 290 PANTHER OS09G0431300 PROTEIN 1 226 - -
Pral2867g00001 290 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pral2867g00001 290 FunFam Transcription factor RAX3 7 68 - -
Pral2867g00001 290 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Pral2867g00001 290 CDD SANT 16 62 IPR001005 -
Pral2867g00001 290 Gene3D - 7 68 - -
Pral2867g00001 290 Gene3D - 69 137 - -
Pral2867g00001 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2867g00001 Pral-Chr2867 1496 3119 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2867g00001 1 118 MYB Transcription Factor Family AT5G57620 86.441 5.43e-76 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral2867g00001 Myb_DNA-binding 3.1e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2867g00001 K09422 - gmx:100301876 331.643