Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2863g00006 ATGGTCGCCAACACTCTTATCCTATTTATTCTGCTGCTTCTTTCATTTTGTTTCCTCTCTTGCGAGGCTTCCTCCCGGAACTCAGATAAGCGCACAGACTATGAGAATTGGATTTCTTGGAACCTCCAGAATTACCGGAAGGCGACGCTTTTGAGGACCCAATGGAATGTGAGAGCACCTGATCTGAAGCTGGGGGTGGCTGAGAGTAACAGGGTCAAAATCACAGTTCGCCAAGACGGTACTGGTGACTTCAGCACCATCACACAAGCGCTGAAGAGCATTCCGCCACGCAACATCAGAAGAGTTATCGTTTCGATTGGACCGGGCGTTTACAGGGAGAAGATTGTGATACCCAAAAATATGCACTTCATAACATTGTTGGGCGACGCCGCGAGTCCACCAACTATTACAGGGAACGATACGGCGTCCGTCTTTGGAAGGGATGGGATGCCATTTGGCACATTCCACAGTGCCACGGCCGCTGTAGATGCTAATTATCTTGTCGCCATCAACATCAAATTTGAGAACACGGCATGGCATGAGGTGGGAAAGGAGGGAGGACAAGCGGTGGCACTTCGCATCTCAGGGACCAAAGCTGCATTTTACAACTGCAGCTTCTACGGGGATCAAGACACGCTCTACGACCACAAAGGACTTCACTACTTTAGTAATTGCTTCATTCAAGGCTCTGTTGATTTCGTCTTCGGCTCCGGTAGATCCCTTTACGAGAACTGCCATTTAAATTCAATAGCGAAGAAGGCGGTGTCAATCACGGCTCAAAAGCGCACAAATGCATCGCTGGAGAGCGGGTTTTCGTTTAAGAACTGCGCCATAACGGGAAGTGGGCAAGTTTATCTGGGAAGAGCGTGGGGTGATTATTCCCGGGTTGTTTTCTCTTACACCTACATGGACAAGATCGTTGTGGCCCAAGGCTGGAGTGACTGGGGTGACCAAAAGCGCGACTTGAGAGTGTATTATGGAGAATACAAGTGCAGCGGACCTGGTGCTAACTTGACAGGAAGAGTGGCATGGGCGCATATCCTCACCGACCAAGAGGCTCTGCCTTTTCTCGGAACTCACTACATTGAAGGCGACACTTGGCTCATTCCCCTCCCCATCTGA 1122 0.4991 MVANTLILFILLLLSFCFLSCEASSRNSDKRTDYENWISWNLQNYRKATLLRTQWNVRAPDLKLGVAESNRVKITVRQDGTGDFSTITQALKSIPPRNIRRVIVSIGPGVYREKIVIPKNMHFITLLGDAASPPTITGNDTASVFGRDGMPFGTFHSATAAVDANYLVAINIKFENTAWHEVGKEGGQAVALRISGTKAAFYNCSFYGDQDTLYDHKGLHYFSNCFIQGSVDFVFGSGRSLYENCHLNSIAKKAVSITAQKRTNASLESGFSFKNCAITGSGQVYLGRAWGDYSRVVFSYTYMDKIVVAQGWSDWGDQKRDLRVYYGEYKCSGPGANLTGRVAWAHILTDQEALPFLGTHYIEGDTWLIPLPI 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2863g00006 373 SUPERFAMILY Pectin lyase-like 73 368 IPR011050 -
Pral2863g00006 373 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 66 368 - -
Pral2863g00006 373 ProSitePatterns Pectinesterase signature 2. 227 236 IPR033131 -
Pral2863g00006 373 Gene3D - 68 371 IPR012334 -
Pral2863g00006 373 Pfam Pectinesterase 74 365 IPR000070 GO:0030599|GO:0042545
Pral2863g00006 373 FunFam Pectinesterase 69 370 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2863g00006 Pral-Chr2863 48962 50906 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2863g00006 2 372 Carbohydrate Esterase AT5G07430 39.037 1.29e-87 267
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2863g00006 K01051 - vvi:100265859 527.709