LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2861g00020	ATGGTGGTGGATCTGGTCTTAGGAACTGTTTATCACGGAAAATGGAGGGGAACTGATGTTGCTATAAAGAGAATTAAAAGGAGCTGCTTTTCAGGAAGATCTTCTGAGCTAGAGCGATTGACAAAAGACTTCTGGAGAGAGGCGCAAATTCTCTCAAATCTTCACCACCCCAACGTGGTTGCTTTTTATGGGGTTGTACCGGATGGAGCTGGAGGAACCTTGGCGACTGTAACTGAATATATGGTTAACGGTTCCCTTAGGCATGTCCTTGTCAAGAAGGATAGATTACTTGATCATCGTAAAAAGCTAATAATTGCCATGGATGCAGCTTTTGGAATGGAATATTTACATTCAAAGAATATTGTTCATTTTGATTTGAAATGTGACAATTTACTTGTCAATCTGAGGGACCCACAGAGACCCATATGTAAGGTTGGAGATTTTGGATTATCAAGAATTAAACGCAATACCCTGGTATCTGGGGGTGTGCGAGGAACCCTTCCTTGGATGGCACCAGAGCTGTTGAACGGCAGTAGCAACCGGGTTTCCGAGAAGGTTGATGTTTTCTCATTTGGCATCTCTATGTGGGAGATATTGACTGGGGAGGAACCTTATGCAGATATGCATTGTGGCGCTATTATCGGGGGGATTGTAAAGAACACTCTTCGACCACCAATTCCTCCCCGTTGTGACCCTGAGTGGAGGAAGCTTATGGAAGAATGTTGGTCACCTGAACCCGATAGCCGACCATCTTTTACTGAGATAACTAGTCGTCTCCGATCAATGTCTATGGCCCTCCAAGCCAAGCCTCATAATCAGTTGCGGCAGACAACAAACGGTGTTCATTCCTGA	852	0.446	MVVDLVLGTVYHGKWRGTDVAIKRIKRSCFSGRSSELERLTKDFWREAQILSNLHHPNVVAFYGVVPDGAGGTLATVTEYMVNGSLRHVLVKKDRLLDHRKKLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLRDPQRPICKVGDFGLSRIKRNTLVSGGVRGTLPWMAPELLNGSSNRVSEKVDVFSFGISMWEILTGEEPYADMHCGAIIGGIVKNTLRPPIPPRCDPEWRKLMEECWSPEPDSRPSFTEITSRLRSMSMALQAKPHNQLRQTTNGVHS	283

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2861g00020	283	Gene3D	Transferase(Phosphotransferase) domain 1	84	282	-	-
	Pral2861g00020	283	SUPERFAMILY	Protein kinase-like (PK-like)	8	258	IPR011009	-
	Pral2861g00020	283	ProSiteProfiles	Protein kinase domain profile.	1	274	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2861g00020	283	Pfam	Protein tyrosine and serine/threonine kinase	8	259	IPR001245	GO:0004672\|GO:0006468
	Pral2861g00020	283	PANTHER	SERINE-THREONINE PROTEIN KINASE	8	262	-	-
	Pral2861g00020	283	SMART	serkin_6	1	265	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2861g00020	283	CDD	STKc_MAP3K-like	8	259	-	-
	Pral2861g00020	283	PIRSF	ILK	2	278	-	-
	Pral2861g00020	283	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	121	133	IPR008271	GO:0004672\|GO:0006468
	Pral2861g00020	283	Gene3D	Phosphorylase Kinase; domain 1	6	83	-	-
	Pral2861g00020	283	PRINTS	Tyrosine kinase catalytic domain signature	115	133	IPR001245	GO:0004672\|GO:0006468
	Pral2861g00020	283	PRINTS	Tyrosine kinase catalytic domain signature	78	91	IPR001245	GO:0004672\|GO:0006468
	Pral2861g00020	283	PRINTS	Tyrosine kinase catalytic domain signature	186	208	IPR001245	GO:0004672\|GO:0006468
	Pral2861g00020	283	PRINTS	Tyrosine kinase catalytic domain signature	230	252	IPR001245	GO:0004672\|GO:0006468
	Pral2861g00020	283	FunFam	Octicosapeptide/phox/Bem1p domain kinase superfamily protein	84	275	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2861g00020	Pral-Chr2861	113128	116664	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2861g00020	6	270	MAP Kinase Kinase Kinase	AT1G16270	81.716	3.28e-157	466

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	TKL-Pl-6	Pral2861g00020		PK_Tyr_Ser-Thr	6.1e-60	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2861g00020	-		-	zju:107426719	514.998