Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2855g00003 ATGGTCCACCTGCAACCAAATCTGATGCCCAAGTGCCCAAAATTTTCATCACCACCAAACCCTTTTCATGCACATTCAACTCCTCAAAATCACATTATTTCTTCAGTTCGTCCCATACACCAATATAGTCCACAGCCACACCATGATCAATTGCTTCCCAAGGCATCCCTTGAATTTTCATCACTCTGTAATAGGCAACACTGGGTCAACCAACCTTCCTTTAACTCAGGGACACCAAGTAATGTTCATACTGATATCCACAAGGGAAGGTCATGGACTGAGGAAGAACACAGGTTATTTCTGATTGGATTGCAAAGATATGGGAAGGGAAATTGGAAGAACATTTCTGAAAATGTTGTGAAGACAAGGACTCCAGTTCAGATTGCCAGCCATGCTCAGAAGTTCTTTAATCACCAAATCAACAAAGGGAACAAAAAGAGAAGAAGAAGAAGCATCCATGATATCACCAATCCTGATGTTCAAACCCAATGTCAGCATCAAAATCATTTTGTTCCTTCAAGTCATGCAATGAATCAATCTTATTACAACCCACAGAATCCCCCAAATGCTGTTCAATCTCTTCAATTTGTAAACCCAAACGGCAGATTTCTTGTGTAA 618 0.4045 MVHLQPNLMPKCPKFSSPPNPFHAHSTPQNHIISSVRPIHQYSPQPHHDQLLPKASLEFSSLCNRQHWVNQPSFNSGTPSNVHTDIHKGRSWTEEEHRLFLIGLQRYGKGNWKNISENVVKTRTPVQIASHAQKFFNHQINKGNKKRRRRSIHDITNPDVQTQCQHQNHFVPSSHAMNQSYYNPQNPPNAVQSLQFVNPNGRFLV 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2855g00003 205 SUPERFAMILY Homeodomain-like 88 139 IPR009057 -
Pral2855g00003 205 Gene3D - 90 140 - -
Pral2855g00003 205 FunFam transcription factor MYB1R1 90 141 - -
Pral2855g00003 205 NCBIfam myb-like DNA-binding domain, SHAQKYF class 89 139 IPR006447 GO:0003677
Pral2855g00003 205 CDD SANT 91 136 IPR001005 -
Pral2855g00003 205 PANTHER TRANSCRIPTION FACTOR KUA1 48 179 - -
Pral2855g00003 205 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 84 140 IPR017930 -
Pral2855g00003 205 ProSiteProfiles SANT domain profile. 87 143 IPR017884 -
Pral2855g00003 205 Pfam Myb-like DNA-binding domain 91 134 IPR001005 -
Pral2855g00003 205 SMART sant 88 138 IPR001005 -
Pral2855g00003 205 ProSiteProfiles Myb-like domain profile. 91 136 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2855g00003 Pral-Chr2855 33504 34215 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pral2855g00003 Myb_DNA-binding 2.2e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2855g00003 - - pcin:129285062 174.481