Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2850g00005 ATGGCCATAGCTTTCGGACGCTTCGACGATTCTTTCAGCCTGGGCTCCATTAAAGCCTACCTTGCTGAGTTCATCTCAACCTTCCTCTTTGTTTTTGCTGGTGTTGGTTCCGCCATAGCCTATGGAAAGTTGACGCATGATGCAGCACTGGATCCCGCAGGGTTAGTGGCAGTGGCAATATGTCATGGATTTGCATTGTTTGTGGCAGTCTCAATTGGAGCTAACATATCTGGAGGCCATGTGAACCCAGCAGTGACCTTTGGATTGGCTATTGGAGGCCAGATCACAATCCTCACTGGTATCTTTTACTGGATTGCTCAGCTTGTTGGCGCCATTGTCGCTAGCTTCCTCCTCAAGTTTGTCACCGGAGGCATGACAACTCCTACTCACACCGTGGCTGCCGGAGTGGGAGCAATAGAAGGAGTGGTTATGGAGATTATTATCACTTTTGCCTTGGTTTACACTGTGTATGCCACAGCTGCTGACCCCAAGAAGGGTTCTCTTGGGACCATTGCTCCCATAGCCATTGGCTTTATTGTTGGCGCCAACATCCTCGCCGCCGGCCCCTTCTCCGGTGGCTCCATGAACCCGGCTCGCTCCTTTGGCCCCGCCGTGGCTTCCGGCGACTTCCGTGACAACTGGATCTACTGGGTTGGACCCCTCGTTGGTGGTGGCTTGGCTGGCCTTATCTATCCCAATGTCTTCATGCACTCTGAACATGCACCTTTGGCTAATGAGTTTTAA 744 0.5202 MAIAFGRFDDSFSLGSIKAYLAEFISTFLFVFAGVGSAIAYGKLTHDAALDPAGLVAVAICHGFALFVAVSIGANISGGHVNPAVTFGLAIGGQITILTGIFYWIAQLVGAIVASFLLKFVTGGMTTPTHTVAAGVGAIEGVVMEIIITFALVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVASGDFRDNWIYWVGPLVGGGLAGLIYPNVFMHSEHAPLANEF 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2850g00005 247 CDD MIP 18 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2850g00005 247 PANTHER AQUAPORIN-8 3 240 IPR034294 -
Pral2850g00005 247 Gene3D Glycerol uptake facilitator protein. 1 246 IPR023271 -
Pral2850g00005 247 FunFam Probable aquaporin TIP1-1 1 247 - -
Pral2850g00005 247 NCBIfam MIP family channel protein 22 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2850g00005 247 PRINTS Major intrinsic protein family signature 18 37 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2850g00005 247 PRINTS Major intrinsic protein family signature 99 118 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2850g00005 247 PRINTS Major intrinsic protein family signature 144 162 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2850g00005 247 PRINTS Major intrinsic protein family signature 62 86 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2850g00005 247 PRINTS Major intrinsic protein family signature 177 199 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2850g00005 247 PRINTS Major intrinsic protein family signature 214 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Pral2850g00005 247 SUPERFAMILY Aquaporin-like 12 242 IPR023271 -
Pral2850g00005 247 ProSitePatterns MIP family signature. 80 88 IPR022357 -
Pral2850g00005 247 Pfam Major intrinsic protein 14 231 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2850g00005 Pral-Chr2850 12927 14503 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2850g00005 3 245 Major Intrinsic Protein MIP AT3G16240 82.787 2.50e-144 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2850g00005 K09873 - cit:102624065 428.713