Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2848g00003 ATGGCACAGTTGTCTCTTAAGATACCAACCATGACCCAGAATTGGCCATCGTTTAATCCTCACCAGAAGTCAGCCGCCGCAATGCCGCCTAGTTTCAATCCCAGTGCAGCTCAACAATTTCAGCAACAGAACTCGCCGCCGCCGCAGCCGTCGTTACCGACGTTGGTGGATGAGTTTCTTGACTTCTCGTCGGCACGGCGGGGGGCTCACGGGCGGTCTGCTAGCGATTCCATTGCTTCCCTCGATGCGGCTTTCCTTGAGGAATGTCGGAACCCAGTGACCGGAGCACATCATGGGTTTGATAGGCTTGACGATGACCAGCTCATGTCCATGTCCTCCAATGACATTGGCTCGGTTTCGTTGCCGCCGTCATCTGCCACTGCATCGGACCCGTCAACGCCTTCGGATGATCAGCATAGCAATAACGAGGAGAAGCCTATGGTAATTGACGACGTCGTTGTGCCGAGACAGACCTTCAATTGCAGAAACAGCTCAAGAATGAAACCGGGGGAGGAGGAGAGCGAATGCAAGAATGAGAGTGACACTCTGCCGGTGGTCGGCGGTGGCGGCGAACCACTCGTTGATCCAAAAAGAGTTAAAAGAATTTTGGCAAATCGGCAGTCGGCTCAGAGATCCAGGGTGAGAAAGCTGCAGTACATTTCTGATTTAGAAAGAAGCGTATCAACTTTGCAGACGGAAGTGTCAGCATTGTCGCCGAGGGTAGCATTCTTGGACCACCAACGTCTGATTCTGAACGTAGACAACAGTACCTTGAAGCAACGTATTGCTGCTTTGGCTCAAGACAAGATTTTCAAAGACGCTCACCACGAAGCATTAAAGAAGGAAATAGAAAGACTAAGACAAATCTATCATCATCAGCAGGAACAACAATACAAATGGCCACCTGCTTCACTCTCCTCCATCACCACCTCCGGCGGCGGCGGCACCACTGCCAAAACAGCCACAACCACCACTAATGCCACCGCAATCTCAGCCCATGGCATGTTTGGACAAGGAACAGCTTGGTCGAGTTGCAGTAAAAGGGCCGAGTCACAGTTGCAGGAACTAATGAGTGTGGGGCTATTGTCAAGTAGCTCCCCGTTCTCAAATGCCTCTATTAGGGCTTTGTTTGCAGTAGCCAAGCCTTGGAAATGCCTGCAAAAACACAAGGAAGAAGCACTATATAGTCCCATGTTGGGTGGCAATGTTGATGATTCAAGATCTACGGCTGGCTTTGCCATTTATTTTGGTCCCAATCTGGTATCATGGAGTTCAAATAAGCAACCTACTATTGCTCGGTCAAGTACTGAAGCAGAATATAAAACCATTGCTACAGCGTCTAGTGATTTGATACGGCTTCAGCAATTCCTTCATGAATTACATATTGTTCTCTGTGATGCTACATTTTTGCATTGTGTAATCTTGGTGCAACTTATCTAG 1440 0.4903 MAQLSLKIPTMTQNWPSFNPHQKSAAAMPPSFNPSAAQQFQQQNSPPPQPSLPTLVDEFLDFSSARRGAHGRSASDSIASLDAAFLEECRNPVTGAHHGFDRLDDDQLMSMSSNDIGSVSLPPSSATASDPSTPSDDQHSNNEEKPMVIDDVVVPRQTFNCRNSSRMKPGEEESECKNESDTLPVVGGGGEPLVDPKRVKRILANRQSAQRSRVRKLQYISDLERSVSTLQTEVSALSPRVAFLDHQRLILNVDNSTLKQRIAALAQDKIFKDAHHEALKKEIERLRQIYHHQQEQQYKWPPASLSSITTSGGGGTTAKTATTTTNATAISAHGMFGQGTAWSSCSKRAESQLQELMSVGLLSSSSPFSNASIRALFAVAKPWKCLQKHKEEALYSPMLGGNVDDSRSTAGFAIYFGPNLVSWSSNKQPTIARSSTEAEYKTIATASSDLIRLQQFLHELHIVLCDATFLHCVILVQLI 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2848g00003 479 PANTHER BASIC LEUCINE ZIPPER 34 28 310 - -
Pral2848g00003 479 MobiDBLite consensus disorder prediction 107 149 - -
Pral2848g00003 479 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 200 215 IPR004827 GO:0003700|GO:0006355
Pral2848g00003 479 FunFam Basic leucine zipper 61 196 269 - -
Pral2848g00003 479 MobiDBLite consensus disorder prediction 107 136 - -
Pral2848g00003 479 SUPERFAMILY Leucine zipper domain 197 251 IPR046347 GO:0003700|GO:0006355
Pral2848g00003 479 CDD RNase_HI_RT_Ty1 400 472 - -
Pral2848g00003 479 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 195 247 IPR004827 GO:0003700|GO:0006355
Pral2848g00003 479 MobiDBLite consensus disorder prediction 162 191 - -
Pral2848g00003 479 CDD bZIP_plant_RF2 198 248 IPR044759 GO:0003700|GO:0006355
Pral2848g00003 479 Coils Coil 276 296 - -
Pral2848g00003 479 Gene3D - 196 295 - -
Pral2848g00003 479 MobiDBLite consensus disorder prediction 1 45 - -
Pral2848g00003 479 SMART brlzneu 193 257 IPR004827 GO:0003700|GO:0006355
Pral2848g00003 479 MobiDBLite consensus disorder prediction 1 55 - -
Pral2848g00003 479 Pfam bZIP transcription factor 197 241 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2848g00003 Pral-Chr2848 36025 41513 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2848g00003 1 275 bZIP Transcription Factor Family AT3G58120 50.498 2.44e-68 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pral2848g00003 bZIP_1 2.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2848g00003 - - pcin:129314259 394.43