Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2847g00004 ATGGCTGATGCAGCGGGTCTAGCTGAGGCAGCAGGATCAAGATTTACTTCCTTGGAGCTTATTGGACAAGGTTCATTTGGTGATGTCTATAAAGCGTTTGACAAGGAGCTCAACAAACAGGTTGCTATCAAAGTGATTGATTTGGATGAATCGGAGGATGAGATTGATGACATTCAGACGGAAATTGCTGTTCTATCACAATGTCGTTGTCCATATATCACTGAGTATTATGGCTCCTATCTCCATCAAACTAAACTTTTTATAATAATGGAGTACATGGCTGGAGGCTCTGTAGCAGACCTACTTCAATCAGGCCAACCCCTTGATGAAGTGTCAATTGCTTGCATTTTACGTGACTTGTTGCATGCTGTTGATTATTTGCACGCTGAAGGAAAAATTCACAGGGACATCAAAGCAAACATTTTATTGTCTGAGAATGGTGATGTGAAGGTTGCAGATTTTGGCGTTTCTGCTCAGCTAACTAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCAGAGGTTATTCAGACTGCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACAACAATTGAGATGGCAAAAGGGGAGCCTCCACTCAGTGACCTTCATCCCATGAGAGTGCTTTTCATCATCCCCCGTGAGAACCCACCACAGCTAGATGAGCATTTTTCTCGTCCCATTAAAGAATTTGTTTCATTGTGTTTAAAAAAGCTTCCAGCTGAGAGGCCAAGTGCCAAGGAACTTCTCAAACATCGTTTTATTCGAACTGCTAGAAAGAGTCCAAAGCTTTTGGAAAGAATAAGGGAGCGTCCCAAGTATCAAATAACAGAAGAGGGGACACCTAGAAATGGTCCAAGAGGTGTAGGGGAGCCATCTGATACGATGAAAGTGGCAAGAGATTTAAGAGAAGAAGCCACTCAATCCATTTCCAGTGGTCAGGGTAAAACTGTGAAGAATTCTGGATGGGACTTCAGCATCAGAGGATCAGAGGGCACTGGAACTTTTCGCAGTGTTGCACGACCACCTCAATATAGAGATAAGAAAACAGATATTTCCCAATATCAACTTGACCAAAATAAGGCAACAGAGAGAGAATATCTTGGGGCATCTTCCTATAGAAGTGCTCTTAATGAATCACCAGAACCTTCCCTTGAAGATGATGAATTGTCTGGGACTGGATCAGGAACTGTTGTTATTCGGTCTCCGAAAGGATCACAATCATCACTCCTTCGTGACCAAAGCTCCCTGTCTAGCAGTAGGCATGCTTCTTTTGAAGATAATTCTTCCAGTGGAACTATTGTTGTCCGTGGTCAGCATGATGATTATGACTCTTCACAGACAGTGAGGTCCAGGCCGGGACTTAATGAGAGAACTGCAAATGCCTCACTTGAAGATAGTGTCTCAAATCTCGCAGAGGCAAAGGCTGCTATCCTAAGGCCAAGAAAAGGAAATACTCGAGAGAGAGTTGCACAGGGAAAGACTGGCAATGATTTGCAGGAAAGCAGAAGAAACCAAGTGACAAGCAGCTCTGATTTCTCAAGATCATCTCGTGTAAACAATGGTCCACAACAGGGAATTTCAAGACTGCGCCATACTGATGATGATCAAGACAACGTCAGAATATTGTCATCCTCTGTGGCATTATCTGTTTTACTTATTCCTTCTTTAAAAGAGGCCTTTGCCAATGATCCAGAAGGGTCTACTGTACAAGAAATAATCAATTCACTCATACACATGGAGCACATAAAGTCTGGATCATGTGATGCTCTGGTCAAAACGTTGCTTCAGAGATTGGCCAGTTCGAAGGAATCTTCATTGAAGGATCTGCAGGGGCTCGCAGCTCAATTATTCACCAAGGCCAAGTCAGCTCCTGAAGAATCCCAAAATGCAACTGCAGAAGTTGATGCCAGGAGGAAACAACAGAACAAAGAACTTCATTCAAATAGCAATCTGGGTCCTCTTGCAAGATTTCTTCTCTCAAGATGGCAAGGTCAAGCCTAA 2037 0.432 MADAAGLAEAAGSRFTSLELIGQGSFGDVYKAFDKELNKQVAIKVIDLDESEDEIDDIQTEIAVLSQCRCPYITEYYGSYLHQTKLFIIMEYMAGGSVADLLQSGQPLDEVSIACILRDLLHAVDYLHAEGKIHRDIKANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQTAEGYNEKADIWSLGITTIEMAKGEPPLSDLHPMRVLFIIPRENPPQLDEHFSRPIKEFVSLCLKKLPAERPSAKELLKHRFIRTARKSPKLLERIRERPKYQITEEGTPRNGPRGVGEPSDTMKVARDLREEATQSISSGQGKTVKNSGWDFSIRGSEGTGTFRSVARPPQYRDKKTDISQYQLDQNKATEREYLGASSYRSALNESPEPSLEDDELSGTGSGTVVIRSPKGSQSSLLRDQSSLSSSRHASFEDNSSSGTIVVRGQHDDYDSSQTVRSRPGLNERTANASLEDSVSNLAEAKAAILRPRKGNTRERVAQGKTGNDLQESRRNQVTSSSDFSRSSRVNNGPQQGISRLRHTDDDQDNVRILSSSVALSVLLIPSLKEAFANDPEGSTVQEIINSLIHMEHIKSGSCDALVKTLLQRLASSKESSLKDLQGLAAQLFTKAKSAPEESQNATAEVDARRKQQNKELHSNSNLGPLARFLLSRWQGQA 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2847g00004 678 Coils Coil 48 68 - -
Pral2847g00004 678 CDD STKc_MST3_like 13 286 - -
Pral2847g00004 678 MobiDBLite consensus disorder prediction 316 344 - -
Pral2847g00004 678 MobiDBLite consensus disorder prediction 406 474 - -
Pral2847g00004 678 SUPERFAMILY Protein kinase-like (PK-like) 12 304 IPR011009 -
Pral2847g00004 678 FunFam serine/threonine-protein kinase dst1 isoform X1 12 298 - -
Pral2847g00004 678 Pfam Protein kinase domain 16 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2847g00004 678 Gene3D Transferase(Phosphotransferase) domain 1 12 295 - -
Pral2847g00004 678 MobiDBLite consensus disorder prediction 282 371 - -
Pral2847g00004 678 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 631 - -
Pral2847g00004 678 ProSiteProfiles Protein kinase domain profile. 15 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2847g00004 678 MobiDBLite consensus disorder prediction 384 474 - -
Pral2847g00004 678 MobiDBLite consensus disorder prediction 501 539 - -
Pral2847g00004 678 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Pral2847g00004 678 MobiDBLite consensus disorder prediction 490 544 - -
Pral2847g00004 678 MobiDBLite consensus disorder prediction 632 660 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2847g00004 Pral-Chr2847 20025 30082 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2847g00004 1 678 MAP Kinase Kinase Kinase Kinase AT3G15220 61.891 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pral2847g00004 Pkinase 1.2e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2847g00004 K08838 - gmx:100814188 929.858