Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2847g00002 ATGGCTGATGCAGCGGGTCTAGCTGAGGCAGCAGGATCAAGATTTACTTCCTTGGAGCTTATTGGACAAGGTTCATTTGGTGATGTCTATAAAGCGTTTGACAAGGAGCTCAACAAACAGGTTGCTATCAAAGTGATTGATTTGGATGAATCGGAGGATGAGATTGATGACATTCAGACGGAAATTGCTGTTCTATCACAATGTCGTTGTCCATATATCACTGAGTATTATGGCTCCTATCTCCATCAAACTAAACTTTTTATAATAATGGAGTACATGGCTGGAGGCTCTGTAGCAGACCTACTTCAATCAGGCCAACCCCTTGATGAAGTGTCAATTGCTTGCATTTTACGTGACTTGTTGCATGCTGTTGATTATTTGCACGCTGAAGGAAAAATTCACAGGGACATCAAAGCAGCAAACATTTTATTGTCTGAGAATGGTGATGTGAAGGTTGCAGATTTTGGCGTTTCTGCTCAGCTAACTAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCAGAGGTTATTCAGACTGCAGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACAACAATTGAGATGGCAAAAGGGGAGCCTCCACTCAGTGACCTTCATCCCATGAGAGTGCTTTTCATCATCCCCCGTGAGAACCCACCACAGCTAGATGAGCATTTTTCTCGTCCCATTAAAGAATTTGTTTCATTGTGTTTAAAAAAGCTTCCAGCTGAGAGGCCAAGTGCCAAGGAACTTCTCAAACATCGTTTTATTCGAACTGCTAGAAAGAGTCCAAAGCTTTTGGAAAGAATAAGGGAGCGTCCCAAGTATCAAATAACAGAAGAGGGGACACCTAGAAATGGTCCAAGAGGTGTAGGGGAGCCATCTGATACGATGAAAGTGGCAAGAGATTTAAGAGAAGAAGCCACTCAATCCATTTCCAGTGGTCAGGGTAAAACTGTGAAGAATTCTGGATGGGACTTCAGCATCAGAGGATCAGAGGGCACTGGAACTTTTCGCAGTGTTGCACGACCACCTCAATATAGAGATAAGAAAACAGATATTTCCCAATATCAACTTGACCAAAATAAGGCAACAGAGAGAGAATATCTTGGGGCATCTTCCTATAGAAGTGCTCTTAATGAATCACCAGAACCTTCCCTTGAAGATGATGAATTGTCTGGGACTGGATCAGGAACTGTTGTTATTCGGTCTCCGAAAGGATCACAATCATCACTCCTTCGTGACCAAAGCTCCCTGTCTAGCAGTAGGCATGCTTCTTTTGAAGATAATTCTTCCAGTGGAACTATTGTTGTCCGTGGTCAGCATGATGATTATGACTCTTCACAGACAGTGAGGTCCAGGCCGGGACTTAATGAGAGAACTGCAAATGCCTCACTTGAAGATAGTGTCTCAAATCTCGCAGAGGCAAAGGCTGCTATCCTAAGGCCAAGAAAAGGAAATACTCGAGAGAGAGTTGCACAGGGAAAGACTGGCAATGATTTGCAGGAAAGCAGAAGAAACCAAGTGACAAGCAGCTCTGATTTCTCAAGATCATCTCGTGTAAACAATGGTCCACAACAGGGAATTTCAAGACTGCGCCATACTGATGATGATCAAGACAACGTCAGAATATTGTCATCCTCTGTGGCATTATCTGTTTTACTTATTCCTTCTTTAAAAGAGGCCTTTGCCAATGATCCAGAAGGGTCTACTGTACAAGAAATAATCAATTCACTCATACACATGGAGCACATAAAGTCTGGATCATGTGATGCTCTGGTCAAAACGTTGCTTCAGAGATTGGCCAGTTCGAAGGAATCTTCATTGAAGGATCTGCAGGGGCTCGCAGCTCAATTATTCACCAAGGCCAAGTCAGCTCCTGAAGAATCCCAAAATGCAACTGCAGAAGTTGATGCCAGGAGGAAACAACAGAACAAAGAACTTCATTCAAATAGCAATCTGGGTCCTCTTGCAAGATTTCTTCTCTCAAGATGGCAAGGTCAAGCCTAA 2040 0.4324 MADAAGLAEAAGSRFTSLELIGQGSFGDVYKAFDKELNKQVAIKVIDLDESEDEIDDIQTEIAVLSQCRCPYITEYYGSYLHQTKLFIIMEYMAGGSVADLLQSGQPLDEVSIACILRDLLHAVDYLHAEGKIHRDIKAANILLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQTAEGYNEKADIWSLGITTIEMAKGEPPLSDLHPMRVLFIIPRENPPQLDEHFSRPIKEFVSLCLKKLPAERPSAKELLKHRFIRTARKSPKLLERIRERPKYQITEEGTPRNGPRGVGEPSDTMKVARDLREEATQSISSGQGKTVKNSGWDFSIRGSEGTGTFRSVARPPQYRDKKTDISQYQLDQNKATEREYLGASSYRSALNESPEPSLEDDELSGTGSGTVVIRSPKGSQSSLLRDQSSLSSSRHASFEDNSSSGTIVVRGQHDDYDSSQTVRSRPGLNERTANASLEDSVSNLAEAKAAILRPRKGNTRERVAQGKTGNDLQESRRNQVTSSSDFSRSSRVNNGPQQGISRLRHTDDDQDNVRILSSSVALSVLLIPSLKEAFANDPEGSTVQEIINSLIHMEHIKSGSCDALVKTLLQRLASSKESSLKDLQGLAAQLFTKAKSAPEESQNATAEVDARRKQQNKELHSNSNLGPLARFLLSRWQGQA 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2847g00002 679 MobiDBLite consensus disorder prediction 385 545 - -
Pral2847g00002 679 MobiDBLite consensus disorder prediction 502 540 - -
Pral2847g00002 679 MobiDBLite consensus disorder prediction 283 372 - -
Pral2847g00002 679 Coils Coil 48 68 - -
Pral2847g00002 679 MobiDBLite consensus disorder prediction 633 661 - -
Pral2847g00002 679 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2847g00002 679 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2847g00002 679 FunFam serine/threonine-protein kinase dst1 isoform X1 12 299 - -
Pral2847g00002 679 MobiDBLite consensus disorder prediction 407 480 - -
Pral2847g00002 679 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2847g00002 679 MobiDBLite consensus disorder prediction 317 345 - -
Pral2847g00002 679 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 10 632 - -
Pral2847g00002 679 SUPERFAMILY Protein kinase-like (PK-like) 12 305 IPR011009 -
Pral2847g00002 679 Gene3D Transferase(Phosphotransferase) domain 1 12 296 - -
Pral2847g00002 679 CDD STKc_MST3_like 13 287 - -
Pral2847g00002 679 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2847g00002 Pral-Chr2847 19663 30082 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2847g00002 1 679 MAP Kinase Kinase Kinase Kinase AT3G15220 62.034 0.0 814
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Pral2847g00002 Pkinase 5.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2847g00002 K08838 - gmx:100814188 936.021