Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2844g00002 ATGAAGCGGGCATGGAAATCGTCCAACAGGGTTTCGTGGGCTCCTGGCGGGAATCTCTGTCAGGTAAAATTGTTCATATCTGAGGATTGCCCGTCAAAAGTTGGCCAAAAATCCCAAGATCGTCTTCAAGCGAAGGTGTCATCAATTTTGCATTCAAGTATTATTGAATTTAATGATTTACCCCCCAGGTTTGAATGCAATCCGCTTCCAAACCAATCAAAGTATGAACACTCTTGCATTCCTCAGATTAATTGGAGATGTCCTCCTCCGTTTGTTTTCAGTTATAATTGGCATGTTGTGGCTGGTGAAGAGAGTAGGGAGAAAGAAGATCAAAAACTTAGAGATCTCAGGGTGCTTGAAGCAGTTTATCCTCGTCACTCAGCCATTCCTCCAAGCCCTTCCGTTGCTTTGGATGTAGAAGAGGAAGATTACGATGATAACACCACTCCTCTGGTTCCTATCATTCCCATTGAGGAAGAGGAGTCAATGTATGATAAACCCGAATTGGCAGCAGGTAGGGACGCTCCTACCACTGTGCAGTCACAAAACTTGCATCAATATATGTCAGCGATCACGGCACCAATTCAATCTAATACCTCCTCTTCTCTTGCCTTAACTGTCTGCGGAAATCCCTCACCTGGGATATCTTCTGGTTCGGAAGTAGATTTAGTTGCTGCCTCTGCTGTTGTGGGTGCCGTTATGAAGAGTAGTGAGCAACGAAGCTTGATTGATATGGATCTACTCGTTAAAATATTTAATGACCCATTAATGATTGAGAAATTAGTTAGTGATCATAGAACTGCTGCCACAACTGCAAGAACATCCTCTAATACCGTGGCAATACCCCCTTCTGGATTGAAGCTTGCCGCACCTTCACTTCCACCGTCGACGCTCACACTTGGTGAGCCAACTTACGGGGTTACACCTGCAATCACTGTGGGTTTGTTATCTTCACGGTTGAAGCCTGAAATTCCACCAGTCTTATCGTCAACATCGATGCCTGATAAGCTGGCAATTCCATCAATTCCCATGTCAATGCCCGGTAAACCTGCAATTCCCTCTGTTCCATTGCAGGCTCCAACACTTGATATGCGGATGCCTGTGAACCAAAGTTGTCACCATATGTCAAATGGAGTTCTGCAAACTTTAGATACCCAGCCTCCTCAACAAGATGATTTACTGGTAACTGGGGCGATGCATGCAGCATCGTTGGCTTCCATGCCAACAATTTCTCTTGGTGGGAACTTGCAACATTCAGTGACATGTCAGGTGCGATCTACTGCCGGCACAATGCTTCACCAAGCAAGTGCAGGTCCAGCATTTGCTGCCAAAGAAGCTCATTCTGTTAAGGATGCCAACTATTTAAAGAACCTGATTAGGCAACATGGTTCAGATAAGCAAGACGTGCAGGACTCACAAATAGGCATCCGGCATAGTAATTTCCAAAATATTAAATCGGTACATAACAATAAACCCGAAGAAGTTGAGTACAAAATCCAGAAGACTTGCATATACTTTAACAGCTCAAGGGGGTGCCGAAATGGTTCCAGCTGTCCCTATCGGCATGATATGTCAATCCGGTGGGAAGCTGATAACGCTCTAGGGGGTCAGAATTCAAAAAGATTGAAACTAGAACCTGAAATTAAGGGAAGAATTTAA 1659 0.4448 MKRAWKSSNRVSWAPGGNLCQVKLFISEDCPSKVGQKSQDRLQAKVSSILHSSIIEFNDLPPRFECNPLPNQSKYEHSCIPQINWRCPPPFVFSYNWHVVAGEESREKEDQKLRDLRVLEAVYPRHSAIPPSPSVALDVEEEDYDDNTTPLVPIIPIEEEESMYDKPELAAGRDAPTTVQSQNLHQYMSAITAPIQSNTSSSLALTVCGNPSPGISSGSEVDLVAASAVVGAVMKSSEQRSLIDMDLLVKIFNDPLMIEKLVSDHRTAATTARTSSNTVAIPPSGLKLAAPSLPPSTLTLGEPTYGVTPAITVGLLSSRLKPEIPPVLSSTSMPDKLAIPSIPMSMPGKPAIPSVPLQAPTLDMRMPVNQSCHHMSNGVLQTLDTQPPQQDDLLVTGAMHAASLASMPTISLGGNLQHSVTCQVRSTAGTMLHQASAGPAFAAKEAHSVKDANYLKNLIRQHGSDKQDVQDSQIGIRHSNFQNIKSVHNNKPEEVEYKIQKTCIYFNSSRGCRNGSSCPYRHDMSIRWEADNALGGQNSKRLKLEPEIKGRI 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2844g00002 552 ProSiteProfiles Zinc finger C3H1-type profile. 497 525 IPR000571 GO:0046872
Pral2844g00002 552 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 6 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2844g00002 Pral-Chr2844 35129 40870 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral2844g00002 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2844g00002 - - gmx:102661587 510.375