Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2837g00007 ATGGCGAACATGAATAATCTTAATGACGAGGAGAATAATGAACATGGGTTACCTTCGATTATCGGCGTTGGCGAAGGAGGTGGTGGTGGTGAGGGTGCCGGTGGGGCAGCGGCAGCAGCGGAGGAGGTTGTCCTCAAGAAGGGACCATGGACGGCGGCCGAGGATGCGGTGCTTATTGATTATGTGACGAAGCATGGCGAAGGGAATTGGAATGCGGTGCAGAGGAATACGGGGTTGGCTCGCTGTGGCAAGAGCTGTAGATTGAGATGGACGAACCATTTGCGTCCAAATCTGAAGAAAGGTGCCTTTTCTCCTGAGGAAGAGAAGCTCATTCTGGAGCTTCATGCTCAGTTCGGCAACAAATGGGCTCGAATGGCCACTCTTTTACCTGGGCGAACAGACAATGAAATCAAGAACTACTGGAATACTAGGGTGAAGCGCCGGCAAAGACAAGGCTTGCCACTGTATTCCAGTGATTCTGATCAGCCAACCACATCTGCAGCACCGGCCACCTCAGGTACAAGACCGGTCACTGGATCCACTGCTGCAAAATTGGATTATTATAGTCAGAACCGCTATCCTCTGTCTTCATTCCATACAGGATCTTCTTATTCCACTCATGCCCCTTTCTTGGACCCCAATTCTCTTTCTTCTTCTTCCTCCTCCTTCCTTACCTTCCCTTCTCAACAGCCTACGTCTGCATTACACATCACTCCACTTCATTCAAAGCGTTGCCGTACCACTTTTTCCCTCCCAGATGCACCTTTGACCACCCCATTGGTGGATTTTGATGGACTCAACTTTCCAGCCCAATTTAATTCAAGTTCGTGTCAAATCTTCCAGACTCCATTGGAGTTATCATCTTCAGTTCCTGGGGTTCTAAGTCCATCTTCCATTTTGTCTACCAAAATGGAGCTCCCTTCAAACCAATTTTCCCCATCCAATAATGACCTGCTGGGGGATCTTCTTCTGGAAGCTCAAGTGTTGGTTTCTGGCCAGAATTCGAAGAAACGAACCTATTCAAGTTTCAGTGAAGGAAATGGTCTCTTAGATGGACATATTGGCTTGGACGATATGCCTCATAGCTCTGTTTACTGGCCTTCAGGACTGAAACCAAGGTCAGAGCCATCAGACATGAATGAGCTTTCCACACTGATCTCTGGAATGCCTTCAACCATTCAGGCTTCTGAATGGCACAATGACATTGCTGCACAAACCTCCAATGTTCAATCTTCTGGTGATATTGTGGGTGATGATAATTTTGAGCTTGATTTCAAGCCTATTGCTTCGTTGATTCCTGTCAACAACACCACAACAAACCCTAATGAAAACCCTGGCTTCTTCTCATGGGACACCTTACCTGGACTCTGCTGA 1374 0.4753 MANMNNLNDEENNEHGLPSIIGVGEGGGGGEGAGGAAAAAEEVVLKKGPWTAAEDAVLIDYVTKHGEGNWNAVQRNTGLARCGKSCRLRWTNHLRPNLKKGAFSPEEEKLILELHAQFGNKWARMATLLPGRTDNEIKNYWNTRVKRRQRQGLPLYSSDSDQPTTSAAPATSGTRPVTGSTAAKLDYYSQNRYPLSSFHTGSSYSTHAPFLDPNSLSSSSSSFLTFPSQQPTSALHITPLHSKRCRTTFSLPDAPLTTPLVDFDGLNFPAQFNSSSCQIFQTPLELSSSVPGVLSPSSILSTKMELPSNQFSPSNNDLLGDLLLEAQVLVSGQNSKKRTYSSFSEGNGLLDGHIGLDDMPHSSVYWPSGLKPRSEPSDMNELSTLISGMPSTIQASEWHNDIAAQTSNVQSSGDIVGDDNFELDFKPIASLIPVNNTTTNPNENPGFFSWDTLPGLC 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2837g00007 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 95 149 IPR017930 -
Pral2837g00007 457 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 29 403 - -
Pral2837g00007 457 ProSiteProfiles Myb-like domain profile. 42 94 IPR001005 -
Pral2837g00007 457 SMART sant 99 147 IPR001005 -
Pral2837g00007 457 SMART sant 46 96 IPR001005 -
Pral2837g00007 457 MobiDBLite consensus disorder prediction 1 34 - -
Pral2837g00007 457 MobiDBLite consensus disorder prediction 153 179 - -
Pral2837g00007 457 Gene3D - 46 99 - -
Pral2837g00007 457 FunFam Transcription factor GAMYB 102 148 - -
Pral2837g00007 457 SUPERFAMILY Homeodomain-like 46 141 IPR009057 -
Pral2837g00007 457 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 45 94 IPR017930 -
Pral2837g00007 457 ProSiteProfiles Myb-like domain profile. 95 145 IPR001005 -
Pral2837g00007 457 MobiDBLite consensus disorder prediction 151 179 - -
Pral2837g00007 457 FunFam MYB-related transcription factor 46 99 - -
Pral2837g00007 457 Pfam Myb-like DNA-binding domain 47 94 IPR001005 -
Pral2837g00007 457 Pfam Myb-like DNA-binding domain 100 143 IPR001005 -
Pral2837g00007 457 CDD SANT 49 94 IPR001005 -
Pral2837g00007 457 CDD SANT 102 143 IPR001005 -
Pral2837g00007 457 Gene3D - 102 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2837g00007 Pral-Chr2837 55529 58421 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2837g00007 26 457 MYB Transcription Factor Family AT4G26930 36.774 1.54e-66 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pral2837g00007 Myb_DNA-binding 1.5e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2837g00007 - - pcin:129317915 759.985