Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2837g00002 ATGGAAGCTAAGGAGTTTGTTTCAGTTTGCGTTGGAATGTCCATGAGAGTTCTGGACCGACTCGTTTTTGCTGCATTCACCTGCATTCTCGCTCTAGGAGGGTCAATAGTGGGGATGATAATGGGAGGGATGAAGGGACAGAGATCAGAAGCAGGAATACTTGATGGAGCTGGGAAAGGAGCAGTATCAGGAGCCATTGCTGCTGTCGAATTGCTTGATTTTGCGGTTCACCATCATCATCAGCCTGTGTCTAAGGTTGCCTTATTAAGCAGTTTATTCAATGGGAAGGTCCTAATGGAATGGGTATATCCAGCCTATCAATGGCATATTAGGATACCAGAAACAATCTACAGAGAAGTATCGGATATTTATGATATGAGAGGAGCGCCAGGATTGTCCCAGAAATTGATTCAAAGCCTCCCTTTGCATCAATTCAACTCCACAACTATGCCAAGTTTATACAATGAATCCTGCTGCTCCATTTGCTTCCAGGAGTTTGAAGATGGAGATGTGATAAGGATGCTTCCAAAATGTGACCATATGTTTCACTTTCACTGTATAGATAAGTGGCTCATCCGACAAGGATCTTGCCCTATGTGTAGAACTTATGTTCTTGAGGATCTTTTTGATATTTAG 636 0.4277 MEAKEFVSVCVGMSMRVLDRLVFAAFTCILALGGSIVGMIMGGMKGQRSEAGILDGAGKGAVSGAIAAVELLDFAVHHHHQPVSKVALLSSLFNGKVLMEWVYPAYQWHIRIPETIYREVSDIYDMRGAPGLSQKLIQSLPLHQFNSTTMPSLYNESCCSICFQEFEDGDVIRMLPKCDHMFHFHCIDKWLIRQGSCPMCRTYVLEDLFDI 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2837g00002 211 SUPERFAMILY RING/U-box 153 207 - -
Pral2837g00002 211 SMART ring_2 159 200 IPR001841 -
Pral2837g00002 211 Pfam Ring finger domain 159 201 IPR001841 -
Pral2837g00002 211 ProSiteProfiles Zinc finger RING-type profile. 159 201 IPR001841 -
Pral2837g00002 211 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 7 202 IPR044523 -
Pral2837g00002 211 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 120 205 IPR013083 -
Pral2837g00002 211 CDD RING-H2_EL5-like 158 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2837g00002 Pral-Chr2837 13445 15631 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2837g00002 1 204 C3H Transcription Factor Family AT1G74410 33.953 2.60e-35 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2837g00002 - K19041 gmx:100305612 256.529