Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2834g00031 ATGGATCCCAATGGTTATGTGGATGATAAAAGTGAAAGTAGATTGTATATCGGGAACCTTGATCTTAGAATAACAGAAGCAGCTCTTATAAAGATGTTTTCTCCATATGGGAAGATTGTATCTGAGGATTTCTTATGGCACACTCGCGGCCCCAAGCGTGGGGAGCCCCGTGGCTTTGCTTTTATCCAGTATAGCTCAAGAGAGGAAGCAGAACTGGCCAAGGAGAAAATGCATGGGAAGTTAGCTTGTGGCCGGCCACTGGTTGTTCGGCTTGCGAGTGAGAAGTGCCTGTTAGAAACAGCCACTAACTCGTCAAAAGTCACGGGAGAAGGGCACAAAATACACCTTACCGGTAATGGCATGGGACAGACAAGTCGCAGTGCAAAAATAGCTGCAATAAAGAACAAATTGAAATCAATAGAGGAGGAGAGCTCTAGGCCAAAGAAGCAGAAGCTAACTGATGATGTATCTTGA 474 0.4515 MDPNGYVDDKSESRLYIGNLDLRITEAALIKMFSPYGKIVSEDFLWHTRGPKRGEPRGFAFIQYSSREEAELAKEKMHGKLACGRPLVVRLASEKCLLETATNSSKVTGEGHKIHLTGNGMGQTSRSAKIAAIKNKLKSIEEESSRPKKQKLTDDVS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2834g00031 157 CDD RRM_RBM18 14 93 IPR039157 -
Pral2834g00031 157 MobiDBLite consensus disorder prediction 138 157 - -
Pral2834g00031 157 Gene3D - 10 101 IPR012677 -
Pral2834g00031 157 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 13 94 IPR000504 GO:0003723
Pral2834g00031 157 SUPERFAMILY RNA-binding domain, RBD 5 97 IPR035979 GO:0003676
Pral2834g00031 157 SMART rrm1_1 14 90 IPR000504 GO:0003723
Pral2834g00031 157 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 15 87 IPR000504 GO:0003723
Pral2834g00031 157 PANTHER HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 51 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2834g00031 Pral-Chr2834 210655 212817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2834g00031 13 95 Eukaryotic Initiation Factors Gene Family AT3G16380 38.554 2.77e-12 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2834g00031 K24527 - gmx:100806572 260.766