Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2830g00001 ATGGAATCTGAGGGGCAAGAGAGGAACTTCAGGCTAGTTTGTTGTGTGGCAGTAAACCCTGATACAGTGTCTGCAGAAAACAATGACTCCTATAAGGTTCTTACAGTGGAAAAAGGAGATTTTCGGCCAGAACATGTGACTCGAAGTAGTCCAAATTCAAGAAATAATGTGGGTACTGCTGAAGATGATAAACATCAAGGGCTAGATGTCGCTAATGAAAGTAAAGGATCCCCTCTACAATGTAAAACCTTTGAAGCCTACAACAAACCAAGTTGTGATAGCAAAGCTTACTTATGTGGTCTTAAAGAGTCTGGGACAGCCAAGTCATCCAATGATGCTGGAAAAGATATGGCTAAAAAAGATGTGGCTATTGACTTCCAGCAGAAAAGCTGCTGTGTTGAGGATGCTTACGTTGTCACTCAGAATTCTATAAACAAAATAAAGCAATCAGACGTGCATTCAGGGGATGAAACAAAGCAAATGACCTCAAGGTCTGGTCATTATGGTTCTCTACGCTCTTTTGCATTTGCTTATCATATTACCAGAGTATTTACTTCCCCTGATATGAGGACGCAGAGTCTTTCTCCCTGTGCTGAGATGAAAGATGTAAACAAACGGCCAGCAATTATATGCAGCTTTTTTGCTAAAGGATGGTGTATCAGAGGTAGTTCATGTAGGTTTCTTCATATAAAAGATCATGTAAATAATACTGGCCAGCAGGCTGCAGGAGACTTGGTTTCTACAAATTGCAAGAGAGAAGGGCAACCGGAGGAAGGTCTGACCGGCAATGCTGAGACATCAGGAATGTCTGACGCTCCAGTTCCATTGGCTGCTTCATTGGCGAGCTCTTCTTTGCATTCTTCTGAATTTTCTCTAAAAGAGACCATCCGTAATGAGCAAGAAGCAAGCCCAAGTCAGCATCCATCTCAAGATAAACATAAGTTTCCATTACTTTTGCAAGAGGACTTGTCTTCTAAGAACCATGTCTTGCCAATTGGTAGAGACAGTTCTATATCCAGGGATCGATTGATCCTTGAAAACAGATCTAATTTTAACGCATCAAACAACTATTTCAGCAGGAATCGCTCTTATCCATCCTGCGTGGAGGGATTGGCTCCCATTGAAAACCAGCACGTGTACAACAAATATGTTTCCCAAGTTTCAGCTCCATCAAGTTATTCAATGTCTTCGAATTTATCTAATGGGGCAAATTCTTTGGATGCTCAAAAGCTGTTGAAAAGTGGCAAAGAATATCATGCTCCTACATCCACTTTCTTAGGTTCAGAATGGGAGGAGATGCCTCTAACTAGTTCATCCGGAGTTCAGCCACAT 1332 0.4159 MESEGQERNFRLVCCVAVNPDTVSAENNDSYKVLTVEKGDFRPEHVTRSSPNSRNNVGTAEDDKHQGLDVANESKGSPLQCKTFEAYNKPSCDSKAYLCGLKESGTAKSSNDAGKDMAKKDVAIDFQQKSCCVEDAYVVTQNSINKIKQSDVHSGDETKQMTSRSGHYGSLRSFAFAYHITRVFTSPDMRTQSLSPCAEMKDVNKRPAIICSFFAKGWCIRGSSCRFLHIKDHVNNTGQQAAGDLVSTNCKREGQPEEGLTGNAETSGMSDAPVPLAASLASSSLHSSEFSLKETIRNEQEASPSQHPSQDKHKFPLLLQEDLSSKNHVLPIGRDSSISRDRLILENRSNFNASNNYFSRNRSYPSCVEGLAPIENQHVYNKYVSQVSAPSSYSMSSNLSNGANSLDAQKLLKSGKEYHAPTSTFLGSEWEEMPLTSSSGVQPH 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2830g00001 444 Gene3D - 200 256 - -
Pral2830g00001 444 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 25 400 - -
Pral2830g00001 444 SMART c3hfinal6 205 231 IPR000571 GO:0046872
Pral2830g00001 444 MobiDBLite consensus disorder prediction 42 64 - -
Pral2830g00001 444 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 210 229 IPR000571 GO:0046872
Pral2830g00001 444 MobiDBLite consensus disorder prediction 291 312 - -
Pral2830g00001 444 MobiDBLite consensus disorder prediction 250 272 - -
Pral2830g00001 444 SUPERFAMILY CCCH zinc finger 205 229 IPR036855 GO:0046872
Pral2830g00001 444 MobiDBLite consensus disorder prediction 291 305 - -
Pral2830g00001 444 ProSiteProfiles Zinc finger C3H1-type profile. 205 232 IPR000571 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2830g00001 Pral-Chr2830 35 1557 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Pral2830g00001 zf-CCCH 3.7e-06 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2830g00001 - - pcin:129306230 612.453