Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2826g00003 ATGTCATATCCGTCAAACCTCGCATCCTCCCCAGCAAGCCCCGACTGGATGAGCAAAGCAGACAATGCATGGCAGCTCACGGCGGCGACACTAGTTGGGATTCAAAGCGTGCCCGGACTCATAATCTTATATGGAGGGGCAGTGAAGAAGAAATGGGCGGTGAACTCAGCCTTCATGTCGCTCTATGCTTTTGCTTGTGTTTTCGTCTGCTGGGTGACATGGGGTTACCGACTGTCGTTTGGGGATAAGCTGCTGCCATTCTGGGGAAAGCCTGCTCTGTCAGTGGACGAGAATTACCTCTTCAAGCAGGCTTTTCTTGGCCTGTTCCCAAACGCCACAATGATGTATTTCCAGGGCGTGTTTGCTTGCATCACCCTCATTCTCGTCGCCGGGGCCGTGTTGGGCCGCATGAACTTCTACGCCTGGATGCTGTTCGTGCCTCTTTGGCTCACTTTCTCCTACACCTTCACAGCTTTCAGCATCTGGTGTCCTGACGGCTTTCTGTCCAAGATGGGCTTAATAGATTACTCTGGAGGATACGTAATTCATCTCTCGTCCGGGGTTGCTGGATTCACTGCAGCATATTGGGTTGGTCCGAGGCTGAACAAGGACAGAGAAAGGTTTCCTCCGAACAACATACTGCTGATGTTGGCAGGAGCGGGATTGCTGTGGATGGGATGGACGGGCTTCAACGGAGGAGACCCTTACTCGGTAAGCATGGACGCGTCCTTGGCTGTGCTGAACACGCACGCATGCACCGCCACCAGCCTGCTCACCTGGGTCGTCCTCGACGTCATCTTCTTCCGCAAGCCTTCCGTGATCGGCGCGGTTCAGGGCATGATCACCGGCTTGGTCTGCATCACTCCTGCTGCAGGTGTTGTGCAGGGATGGGCCGCCATCATCATGGGGATGTGCTCGGGCTCCATTCCCTGGGTCACAATGATGGTAGTGCACAAGAGATCTAAGCTGCTTCAGAAGGTGGACGACACTATGGCCGTGTTCCACACTCATGCCGTCGCCGGATCTCTGGGAGGCATCCTCTCGGGCCTCTTTGCGGAGCCGAAGCTCAACTTTCTGTTCTATGGCGCCTACAACAAATATGTGGGCCTCTTCTATGGTCTCCAAATGAGAGACGCCAAAACCGGCCTCCGACAGATGGGGGTCCAGCTGCTGGGGATCTTGTTTGTGACGCTGCTCAATGTGGTCGCCACCAGCTTGATATGTCTCTTCATTCGGCTGTTGATGCCTTTGAGGATGTCGGAAGAGGATATGGAGGTAGGGGACGAGGCTGCTCACGGGGAAGAGGCGTATGCCATATGGGGTCAGGGTGATAAGCTTGACAATTCCGTTTCCAAGTACGGGAGTTCCTTGTACGACGATATTGAGGCTGCAGATCAGGCCAGAAAGAAGCGCGCAGCTGCACAAGTTGAGATGACATAG 1440 0.5451 MSYPSNLASSPASPDWMSKADNAWQLTAATLVGIQSVPGLIILYGGAVKKKWAVNSAFMSLYAFACVFVCWVTWGYRLSFGDKLLPFWGKPALSVDENYLFKQAFLGLFPNATMMYFQGVFACITLILVAGAVLGRMNFYAWMLFVPLWLTFSYTFTAFSIWCPDGFLSKMGLIDYSGGYVIHLSSGVAGFTAAYWVGPRLNKDRERFPPNNILLMLAGAGLLWMGWTGFNGGDPYSVSMDASLAVLNTHACTATSLLTWVVLDVIFFRKPSVIGAVQGMITGLVCITPAAGVVQGWAAIIMGMCSGSIPWVTMMVVHKRSKLLQKVDDTMAVFHTHAVAGSLGGILSGLFAEPKLNFLFYGAYNKYVGLFYGLQMRDAKTGLRQMGVQLLGILFVTLLNVVATSLICLFIRLLMPLRMSEEDMEVGDEAAHGEEAYAIWGQGDKLDNSVSKYGSSLYDDIEAADQARKKRAAAQVEMT 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2826g00003 479 Gene3D Ammonium transporter AmtB like domains 5 441 IPR029020 -
Pral2826g00003 479 SUPERFAMILY Ammonium transporter 16 419 - -
Pral2826g00003 479 ProSitePatterns Ammonium transporters signature. 175 200 IPR018047 GO:0008519|GO:0016020|GO:0072488
Pral2826g00003 479 PANTHER AMMONIUM TRANSPORTER MEP2 5 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pral2826g00003 479 PRINTS Rhesus blood group protein signature 118 134 IPR002229 GO:0005886
Pral2826g00003 479 PRINTS Rhesus blood group protein signature 214 232 IPR002229 GO:0005886
Pral2826g00003 479 PRINTS Rhesus blood group protein signature 245 267 IPR002229 GO:0005886
Pral2826g00003 479 Pfam Ammonium Transporter Family 23 437 IPR024041 GO:0008519|GO:0016020|GO:0072488
Pral2826g00003 479 NCBIfam ammonium transporter 21 437 IPR001905 GO:0008519|GO:0016020|GO:0072488
Pral2826g00003 479 FunFam Ammonium transporter 5 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2826g00003 Pral-Chr2826 10064 11590 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2826g00003 112 465 Inorganic Solute Cotransporters AT2G38290 62.147 1.81e-144 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2826g00003 K03320 - gmx:100787856 814.683