Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2820g00004 ATGGAGGCTTGGGTCATCGGCGTCGTCTCTCTCGTTCTCTGCTTTTCCATAAGACCACTCCTCACTCTTCTCTTCCCCTCGCTCAAGAAATCACATCGTCTTCCTCCAGGTCCTCTCCCCATTGTTGGCACCCTCTTGTTTCTTCGCATATCTTTCAATAAACTCGAGCCTCTCCTTCTTCGTCTTCATGCCAAGTACGGTCCCATCATCACCTTCCCCATCGGCTTCTTTCCTGCCATTTTCATCGCCGACAGATCCCTCGCCTACCAAGCCCTTGTTCAGAACGGCGCCGTCTTCAGTGACCGTCCCAAAGCCCTCGCCACCAGCAAGATCATCAACAGTCACCAGCACAACATCAGCTCCTCCGGCTACGGCCCCACCTGGCGTGCCCTCCGCCGTAACCTCACCGCCGAGATCCTCCACCCCTCCCGGATCAAGTCCTTCTACGGTACCCGCCGGTGGGTGGCCGACAAGCTCGTCCAAAAGTTGAGGGTTCACTGCGAAACCTCCAATCGCATCAAACTCATGGATCATATTCTGCATGCCATCTTCAGCTTGCTGGCTTTCATGTGTTTCGGTGAGAAGCTGTCCGACAAGCAAATCAACGAGATCGAACGTGTCCAGCGAACTATACTTTTGAGGTACAACAGGTTCCTGATGCTGAACTTCTGGCCGAAAATGGCAAAGATATTGCTGCGAAAACGATGGGATGAGTTCATGCAACTACGGAACGACCAGGCCAACGTGATGGTTCCTCTGATAAGAGCAAGGACGCTCGTCAAGGAAGAGAGACTGAGCAAAGCAAAAGAGGACGAGAAAGGAGAAGTGATAGTGGCATACGTGGATACTCTGCTGGATTTAGAGTGGCCTGAGGAGAAGCGAAGGCTTGAAGAAGATGAAATCGTCAATTTGATTTCGGAGTTTCTGAATGCTGGAACAGACACCACAGCCACATCACTGGAATGGATCATGGCCAACTTGGTGAAGTACCCACAGCTCCAACAACGCCTCTACGACGAAATCAAATCTGTGATGGGGGACTCAAAGGAGAGGATGGTGAATGAAGCTTATTTAGGAAAGCTTCCATATCTGAAGGCCGTGATCCTGGAGGGCTTGAGGCGTCACCCTCCTGGTCGAGTTCTGATCCCACACTCTGTGACGAAGGACGTGGTTCTGAATGATCACTTGGTGCCCAAGAACGGAACTGTGAATTTCATGGTGGCCCAAATGGGTTGGGATCCGAAGGTGTGGGAGGACCCAATGGAGTTCAAGCCAGAGAGATTCCTGAACAGGGAGAAGAATGAGGTGGAGGCGTTTGATTTCACAGGGACGAAGGAGATAAAGATGATGCCGTTTGGGGCGGGAAGGAGGATGTGCCCAGGCAACAACTTGGCCATACTCCATATGGAATATTTTGTGGCCAACTTGATTTGGAATTTCGAGTGGAAATCCCCAGACGGGGACGTTGATTTGACTGAGAAACAGGAATTCACCATGATGATGAAAACTCCGTTGCACGTCTCTTTATCCCCAAGATTTTAA 1542 0.5097 MEAWVIGVVSLVLCFSIRPLLTLLFPSLKKSHRLPPGPLPIVGTLLFLRISFNKLEPLLLRLHAKYGPIITFPIGFFPAIFIADRSLAYQALVQNGAVFSDRPKALATSKIINSHQHNISSSGYGPTWRALRRNLTAEILHPSRIKSFYGTRRWVADKLVQKLRVHCETSNRIKLMDHILHAIFSLLAFMCFGEKLSDKQINEIERVQRTILLRYNRFLMLNFWPKMAKILLRKRWDEFMQLRNDQANVMVPLIRARTLVKEERLSKAKEDEKGEVIVAYVDTLLDLEWPEEKRRLEEDEIVNLISEFLNAGTDTTATSLEWIMANLVKYPQLQQRLYDEIKSVMGDSKERMVNEAYLGKLPYLKAVILEGLRRHPPGRVLIPHSVTKDVVLNDHLVPKNGTVNFMVAQMGWDPKVWEDPMEFKPERFLNREKNEVEAFDFTGTKEIKMMPFGAGRRMCPGNNLAILHMEYFVANLIWNFEWKSPDGDVDLTEKQEFTMMMKTPLHVSLSPRF 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2820g00004 513 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Pral2820g00004 513 Gene3D Cytochrome P450 28 513 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 20 505 - -
Pral2820g00004 513 Pfam Cytochrome P450 35 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 CDD CYP77_89 65 506 - -
Pral2820g00004 513 SUPERFAMILY Cytochrome P450 36 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 PRINTS E-class P450 group I signature 365 383 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 PRINTS E-class P450 group I signature 406 430 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 FunFam Cytochrome P450 family protein 28 513 - -
Pral2820g00004 513 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pral2820g00004 513 PRINTS P450 superfamily signature 366 377 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2820g00004 Pral-Chr2820 75099 76662 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2820g00004 1 512 Cytochrome P450 AT1G64940 55.086 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2820g00004 K24184 - jre:109003786 627.091