Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2819g00036 ATGGACTACACCACTGTGCCTGAATTGCAGCCAAATCCAATGCCAGCACCCCTTTCTTCTTACCCACCTTCTGTAGCCGCTTATTTTCCCCCATCATACCCTCCCCATTACCAATTATACCTTCAAAACCCTAATCCTTCTTCTGCAGAGCCTCAATCTTCTATTGGAACTCAAGGATTTCATGGTGGCACCGGTGCTGAACCTGGGGCGAACCCTCCTGGTGTTGTTGCTTCCTATGCCCCCTTGACCTCCGATTCAGTTAACCATCTGACTCACGAAGCCCATGCTGATTACTCGTATGCTCACAACCCTATTGCAGATTCTAGCTCCGGATACTATTTTGGCCCAAATGCTCAGAATTGGGCTGCTACGGAGGCTGTTAGGCAGTTCGGGGTGGACCCGGCTGGCTATGGAGCAGCTATCCCCGTGGCTTCAACTGGGTCGGAGCAATTGGCTGCTGCAAATACTAACTCTGTTTGGTGGGCTAACACCACGACCCAGCCTCATGGAAATGGAGCATGGAAGAAACACCCGAAGAAACCAAAAACTAAGGTTGTCCAATCTGCATATTGTGAAGTTTGCAAGGTAGATTGTACCAGCAAAGATGTTCTGGACCAGCATAAGTTAGGAAAGAAGCACAAGAAGAACTTGGAGAAATTAAAAGAAGCATTAAGAGTGCCACAAGTTCCTGTTCCACCCGCGGTGCCACCTAATCCTGTGATAGGACCTCAACCGGAGGGAGACAAAAGCAAATCTGGTGGTAAGAGTAAGAGTAAAAGGAAAGCGATTGAAACACCAGAAGATTTGGAGAAAAAGAAAAAGAAGGTTCTTGAAGGTGGGGCAGCCGCAGAAGCAGTTAAAATATGTACGATTTGTAATGTGGTCTGTAATAGCGAGACGGTATTTAATTATCACCTTGCAGGGCAAAAGCATGCTGCTGTGATGAAGAAACAAGCTTCTTTGCAAAAATAA 972 0.4681 MDYTTVPELQPNPMPAPLSSYPPSVAAYFPPSYPPHYQLYLQNPNPSSAEPQSSIGTQGFHGGTGAEPGANPPGVVASYAPLTSDSVNHLTHEAHADYSYAHNPIADSSSGYYFGPNAQNWAATEAVRQFGVDPAGYGAAIPVASTGSEQLAAANTNSVWWANTTTQPHGNGAWKKHPKKPKTKVVQSAYCEVCKVDCTSKDVLDQHKLGKKHKKNLEKLKEALRVPQVPVPPAVPPNPVIGPQPEGDKSKSGGKSKSKRKAIETPEDLEKKKKKVLEGGAAAEAVKICTICNVVCNSETVFNYHLAGQKHAAVMKKQASLQK 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2819g00036 323 SMART ZnF_U1_5 284 318 IPR003604 GO:0003676|GO:0008270
Pral2819g00036 323 SMART ZnF_U1_5 186 220 IPR003604 GO:0003676|GO:0008270
Pral2819g00036 323 MobiDBLite consensus disorder prediction 39 60 - -
Pral2819g00036 323 Gene3D Classic Zinc Finger 257 319 - -
Pral2819g00036 323 Gene3D Classic Zinc Finger 173 220 - -
Pral2819g00036 323 SUPERFAMILY beta-beta-alpha zinc fingers 285 317 IPR036236 -
Pral2819g00036 323 MobiDBLite consensus disorder prediction 39 74 - -
Pral2819g00036 323 SMART c2h2final6 189 213 IPR013087 -
Pral2819g00036 323 SMART c2h2final6 287 311 IPR013087 -
Pral2819g00036 323 PANTHER ZINC FINGER PROTEIN 385B-LIKE 58 322 - -
Pral2819g00036 323 SUPERFAMILY beta-beta-alpha zinc fingers 176 221 IPR036236 -
Pral2819g00036 323 MobiDBLite consensus disorder prediction 229 243 - -
Pral2819g00036 323 MobiDBLite consensus disorder prediction 224 267 - -
Pral2819g00036 323 Pfam Zinc-finger of C2H2 type 288 311 - -
Pral2819g00036 323 Pfam Zinc-finger of C2H2 type 190 213 - -
Pral2819g00036 323 MobiDBLite consensus disorder prediction 250 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2819g00036 Pral-Chr2819 170782 173396 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2819g00036 185 321 C2H2 Transcription Factor Family AT5G61190 31.387 3.92e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2819g00036 - - qsa:O6P43_009136 323.168