Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2819g00020 ATGAAGAAACAACAGATCTTTCTTCGCTTCGTGCTTGTGTGGTTGGTGGCGGCGGTGGTCGGAGCATCAGAAGGAGGCGGAGTAAGAGAAGAGGAAGAAGCTGATAGGATCGTGGAACTGCCCGGCCAACCCAAAGTGTCGTTCCAACAATTCTCAGGCTACGTTACTGTGAATCACGTTCCTGGTAGAGCCCTCTTTTACTGGCTCACTGAATCCCCTCAAAACGCCTTCTCCAAACCCCTCGTCATTTGGCTCAATGGAGGTCCTGGTTGTTCATCGGTGGCGTATGGAGCATCCGAGGAGATTGGCCCGTTCAGAATCAACAGAACTGCTTCGGGGTTATACCTTAACAAGTTCTCCTGGAACTCCGTCGCCAACCTCCTCTTCTTGGAAGCTCCCGCCGGCGTCGGCTTTTCCTACGCCAACCGCTCCTCCGATCTCTATGACAGCGGCGACCGCCGCACCGCGAAGGACTCCCTGGAATTCATAATCAGGTGGCTAGAACGATTCCCACGGTACAAGAATCGGGAACTTTATATCAGTGGAGAGAGCTACGCAGGCCATTATGTTCCTCAATTGGCCAGAGAAATCGTCACGTATAATTCAAAAGCCAAGCACCCAATCAATATCAAAGGAATTTTGGTTGGGAATGCAGTGACGGACAATTACTATGATAACTTGGGGACGGTGACGTACTGGTGGAGCCACGCTATGATCTCCGATCAGACTTACAGGCAGCTCATGAGCACCTGCGATTTCCACCGGCAGAAGGAATCCGACGAGTGTGAGTCGTTGTATAGCTACGCAATGGACCAAGAATTCGGTAACATTGATCAGTATAACATTTATGCTCCTCCATGCAACAACTCCGATGGCAGCTCCTCCGCCACCCGCCACTCCATGCGCTTGCCCCACCGCCCTCATCATCCGATGTTTAGGCAAATGTCTGGGTATGATCCGTGCACAGAGAAGTATGCTGAGATATACTACAATAGACCAGATGTTCAGAAAGCACTCCATGCTAACACAACGGCCATTCCTTACAAGTGGACTGCTTGCAGTGAGGTTTTGAATCGAAACTGGAACGATACAGAGGTATCCATACTTCCCATCTATAGAGAGTTGATGGCACATGGAACCAGAGTCTGGATTTTCAGTGGGGATGTTGATTCGGTGGTGCCAGTTACTGCAACTAGATATTCCCTTGCACAGCTGAAGCTGGTGACCAAGGTTCCTTGGTATCCTTGGTACGTCAAGAAGCAGGTTGGAGGGTGGACAGAGGTATACGAAGGGCTTACATTCGCAACAGTAAGAGGGGCTGGTCATGAAGTGCCACTGTTCAAGCCCAGAGCTGCTCTCCAGTTATTCAAATCATTCATTGCAGGAAAACCTCTGCCCAAGTCCTGA 1407 0.5032 MKKQQIFLRFVLVWLVAAVVGASEGGGVREEEEADRIVELPGQPKVSFQQFSGYVTVNHVPGRALFYWLTESPQNAFSKPLVIWLNGGPGCSSVAYGASEEIGPFRINRTASGLYLNKFSWNSVANLLFLEAPAGVGFSYANRSSDLYDSGDRRTAKDSLEFIIRWLERFPRYKNRELYISGESYAGHYVPQLAREIVTYNSKAKHPINIKGILVGNAVTDNYYDNLGTVTYWWSHAMISDQTYRQLMSTCDFHRQKESDECESLYSYAMDQEFGNIDQYNIYAPPCNNSDGSSSATRHSMRLPHRPHHPMFRQMSGYDPCTEKYAEIYYNRPDVQKALHANTTAIPYKWTACSEVLNRNWNDTEVSILPIYRELMAHGTRVWIFSGDVDSVVPVTATRYSLAQLKLVTKVPWYPWYVKKQVGGWTEVYEGLTFATVRGAGHEVPLFKPRAALQLFKSFIAGKPLPKS 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2819g00020 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 166 191 IPR001563 GO:0004185|GO:0006508
Pral2819g00020 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 432 445 IPR001563 GO:0004185|GO:0006508
Pral2819g00020 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 140 IPR001563 GO:0004185|GO:0006508
Pral2819g00020 468 PRINTS Carboxypeptidase C serine protease (S10) family signature 117 129 IPR001563 GO:0004185|GO:0006508
Pral2819g00020 468 FunFam Carboxypeptidase 368 462 - -
Pral2819g00020 468 FunFam Carboxypeptidase 31 289 - -
Pral2819g00020 468 SUPERFAMILY alpha/beta-Hydrolases 33 466 IPR029058 -
Pral2819g00020 468 ProSitePatterns Serine carboxypeptidases, histidine active site. 432 449 IPR033124 GO:0004185
Pral2819g00020 468 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 38 449 IPR001563 GO:0004185|GO:0006508
Pral2819g00020 468 ProSitePatterns Serine carboxypeptidases, serine active site. 180 187 IPR018202 GO:0004185
Pral2819g00020 468 Gene3D - 368 462 - -
Pral2819g00020 468 Pfam Serine carboxypeptidase 42 461 IPR001563 GO:0004185|GO:0006508
Pral2819g00020 468 Gene3D - 321 358 - -
Pral2819g00020 468 FunFam Carboxypeptidase 317 465 - -
Pral2819g00020 468 Gene3D alpha/beta hydrolase 31 289 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2819g00020 Pral-Chr2819 90537 95090 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2819g00020 326 465 Calmodulin-binding Proteins AT2G22960 31.915 6.01e-16 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2819g00020 K16297 - gmx:100807680 826.624