Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2819g00017 ATGTTTCCTTCTTCCTGTACTTCACTGATCAAATGGCGTTTCTTTCATAAGCCCATGTCCCCCTTGCTTGTTCTGGAATTTTACTTTGTCTTATGGGTCCTCTTCACGTCTTGTAGTGACGCCTTTCCCGCCGATTCGGACAAATCAGTGCTTCTTCATTTCAAGAATTCGGTCTCTGATCCATCGGGGCTGCTTTCGAGCTGGAATTCGGCCGGAGATTCCAAGCACTGTTCTTGGTTCGGTGTTCTCTGCGACTCGAATTCGCGGGTTGTCGCTCTCAACATTACTGGAAATGGTGGTCGAAGTAATCGAAGCTCTTCTCCGTGTTCTGATTCTGCTGAATTTCCACTTTATGGGTTTGGAATTAGGAGGAGCTGTGACAGCAGTAGAGGAGCATTGTTTGGGAAGGTCTCGCCTCTGATCAGTAAGCTTACTGAGCTCAGAATTCTGTCACTTCCGTTTAATGGTTTCGAGGGTGAAATTCCTTCTGAAATTTGGGGTATGGGCAAGTTGGATGTTCTCGACCTGGAGGGCAACTCCGTAACTGGGTCACTGCCGCCCCATTTCGATGGCTTGAGGAACTTGCGCGTTCTAAACCTTGGTTTTAATAAAATTGTGGGGGAGATACCGAACTCACTTGCCCGTCTTGAAAGTTTGGAAATTTTGAATTTAGCTGCAAATGGCTTGAATGGATCTGTTCCTGGGTTCATCGGTAAGCTGAAGGGGGTGTATCTACTCTCTAATCTGCTTACTGGGCCTATTCCACTTGAGATCGGGGATAACTGTGTGAAGCTTGAACATCTGGATTTGTCTGGTAACTTCTTAGTTCAGCGAATTCCAAGCAGTTTGGGTAATTGTAGTCAATTGCGGACACTTCTGCTGTATTCAAATCTGTTGGAAGAGGTAATTCCTCCCGAACTTGGTAAACTTAAGGTGCTTGAAGTCTTGGATGTTTCAAGAAACGCTCTCAGTGGTCCAGTACCTCCCGAAATTGGGAATTGTTCGGAGTTGTCTGTCCTTGTGCTGTCAAATCTTTTCAATCCGCTTCCTGAAGTCAACGATACTTTGAGGGAATCTTCGCAATTGGTTTCTATAAATGATGAATTGAATTATTTTGAAGGTGCCATGCCTGTGGAAATTACATCTCTCCCAAAGCTGAGAATATTGTGGGCACCAAGGGCAACTCTGGAAGGTAGTTTCCCAAACAGTTGGGGTGCTTGTGATAACTTAGAGATGGTCAATTTGGCTCAAAATTATTTCACTGGGGAATTTCCAAATCAGCTTAGTGGCTGCAAGAAGTTGCATTTTCTTGACTTAAGCTCGAACAACCTTACTGGAGAGCTTGCTGAAGAACTTCGTGTTCCCTGTATGACCGTGTTTGATGTCAGTGGGAATATCTTGTCTGGTTCAATTCCTGGATTCCTTAATGTTACTTGTCCTTCAGTTCCTTCCTGGGATGGCAAGCTGTTTGACCTTGACAATGTCTCAATTCCATATATGTCCTTTTTTTCATCAAAGGTTCATGATGGATCCCTGTTGACTTCGGTGGGAGGAGTTGGTCTTTCAGTTATTCACAATTTTGGGAACAACAATTTTACTGGCATGCAGGCACTGCCCATAGCACATGACAGGTTGGGAAAGAAAATGGGTTATGCGTTTCTTGTCGGAGAAAACAAGCTTGCAGGGCCGTTTCCTACCAACGTGTTTGATATGTGTGATGGATTAGATGCATTGCTCTTAAATGTCAGTTATAATAGGTTATCTGGCCAGATTCCTGCGAAGTTTGGCGGGATGTGCCGGTCATTAAAGTTTTTGGACGCATCCGGGAATCGGATAACTGGACCAATTCCTGTTGGTTTAGGGGAATTGGTATCTCTTGTTTCTCTTAACCTTAGTCGGAATCAGTTACAAGGTTCGATTCCTGTCAGCCTTGGCCAAATGAAAAATCTTGTGTTTCTTTCTTTGGCCTCTAATAACTTAACTGGCTCCATTCCTTCCGAGCTGGGGCAGTTGTACTCTTTAGAGGTTTTGGATCTTTCATCTAATTCTCTCACGGGTGAGATTCCAAAGGGTTTTGAGAACTTGAGAAATCTGACTGGTCTTCTTCTCAACAACAACAAACTTTTTGGACATATTCCTACCGGTCTGGCAAATGTCACTACACTCTCAGCGTTTAATGTGTCCTTCAATAACTTGTCTGGATCACTGCCATCAAATAATAACTTGTTGAAATGCAGCAGTGCTGTTGGGAATCCTTTTTTACGTCCTTGCCATATGGTTTCTTTGAATGCGCCATCAACAGATCAGCAAGGGCAGGTAGCTGATTCTAATTCTTATACTGCTGCACCACCAGAAACTGCCAGCAAAGGTGGTGGGTCTGGCTTCAATTCTATTGAAATAGCATCTATAACGTCTGCATCAGCTATCGTTTCTGTTCTGATAGCCCTAATTATTCTGTTCTTTTATACTCGTAAGTGGAACTCCAGGTCCAGGGTTGTTGGTTCCACAAGAAAAGAAGTTATTGTATTTACTGATATTGGGGTTCCATTGACTTTCGAAACTGTTGTTCGTGCCACTGGTAATTTCAATGCCAGCAATTGTATTGGAAATGGAGGATTTGGAGCAACCTACAAGGCAGAGATAGCACCAGGAAATCTAGTGGCAATAAAACGTCTCTCGGTAGGACGATTCCAAGGTGTTCAACAATTTGATGCAGAGATAAAGACCCTTGGAAGACTTCGCCATCCAAATCTTGTCACTTTGTTTGGCTATCATGCCAGTGAGACTGAGATGTTTCTGATATACAATTATTTGCCGGGTGGGAACCTGGAAAAGTTTATCCAGGAGAGGTCGACAAGGGCCGTGGATTGGAGAATTCTTCACAAGATTGCATTGGACATTGCCCGGGCACTTGCCTACCTCCATGATACGTGTGTACCACGTGTCCTCCATCGCGATGTGAAGCCCAGCAACATACTGTTGGATGATGATTTCAATGCATATTTGTCTGACTTTGGATTGGCCAGACTTCTGGGAACTTCTGAAACCCATGCTACTACAGGGGTGGCAGGAACATTCGGTTATGTTGCGCCTGAGTATGCCATGACTTGTCGGGTTTCTGACAAGGCTGACGTGTACAGTTATGGTGTTGTCCTTCTAGAGTTGCTCTCAGACAAGAAGGCATTAGATCCTTCTTTTTCTTCCTATGGGAATGGCTTCAACATAGTAGCATGGGCATGCCTGCTACTTCGGCAAGGGAGAGCAAAGGAGTTTTTCACCGCTGGGTTATGGGATGCAGGACCCTCGGATGATTTGGTAGAGGTATTGCACTTGGCCATTATGTGTACCGTTGATTCCCTCTCGACGAGACCTTCAATGAAACAGGTTGTACGAAGGCTAAAGCAACTTCAACCGCCATCGTGCTAG 3426 0.4448 MFPSSCTSLIKWRFFHKPMSPLLVLEFYFVLWVLFTSCSDAFPADSDKSVLLHFKNSVSDPSGLLSSWNSAGDSKHCSWFGVLCDSNSRVVALNITGNGGRSNRSSSPCSDSAEFPLYGFGIRRSCDSSRGALFGKVSPLISKLTELRILSLPFNGFEGEIPSEIWGMGKLDVLDLEGNSVTGSLPPHFDGLRNLRVLNLGFNKIVGEIPNSLARLESLEILNLAANGLNGSVPGFIGKLKGVYLLSNLLTGPIPLEIGDNCVKLEHLDLSGNFLVQRIPSSLGNCSQLRTLLLYSNLLEEVIPPELGKLKVLEVLDVSRNALSGPVPPEIGNCSELSVLVLSNLFNPLPEVNDTLRESSQLVSINDELNYFEGAMPVEITSLPKLRILWAPRATLEGSFPNSWGACDNLEMVNLAQNYFTGEFPNQLSGCKKLHFLDLSSNNLTGELAEELRVPCMTVFDVSGNILSGSIPGFLNVTCPSVPSWDGKLFDLDNVSIPYMSFFSSKVHDGSLLTSVGGVGLSVIHNFGNNNFTGMQALPIAHDRLGKKMGYAFLVGENKLAGPFPTNVFDMCDGLDALLLNVSYNRLSGQIPAKFGGMCRSLKFLDASGNRITGPIPVGLGELVSLVSLNLSRNQLQGSIPVSLGQMKNLVFLSLASNNLTGSIPSELGQLYSLEVLDLSSNSLTGEIPKGFENLRNLTGLLLNNNKLFGHIPTGLANVTTLSAFNVSFNNLSGSLPSNNNLLKCSSAVGNPFLRPCHMVSLNAPSTDQQGQVADSNSYTAAPPETASKGGGSGFNSIEIASITSASAIVSVLIALIILFFYTRKWNSRSRVVGSTRKEVIVFTDIGVPLTFETVVRATGNFNASNCIGNGGFGATYKAEIAPGNLVAIKRLSVGRFQGVQQFDAEIKTLGRLRHPNLVTLFGYHASETEMFLIYNYLPGGNLEKFIQERSTRAVDWRILHKIALDIARALAYLHDTCVPRVLHRDVKPSNILLDDDFNAYLSDFGLARLLGTSETHATTGVAGTFGYVAPEYAMTCRVSDKADVYSYGVVLLELLSDKKALDPSFSSYGNGFNIVAWACLLLRQGRAKEFFTAGLWDAGPSDDLVEVLHLAIMCTVDSLSTRPSMKQVVRRLKQLQPPSC 1141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2819g00017 1141 ProSitePatterns Protein kinases ATP-binding region signature. 868 890 IPR017441 GO:0005524
Pral2819g00017 1141 MobiDBLite consensus disorder prediction 767 791 - -
Pral2819g00017 1141 SMART serkin_6 862 1140 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2819g00017 1141 SUPERFAMILY Protein kinase-like (PK-like) 844 1133 IPR011009 -
Pral2819g00017 1141 Gene3D Phosphorylase Kinase; domain 1 823 937 - -
Pral2819g00017 1141 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 306 1135 - -
Pral2819g00017 1141 Pfam Leucine rich repeat N-terminal domain 44 85 IPR013210 -
Pral2819g00017 1141 Gene3D Ribonuclease Inhibitor 243 347 IPR032675 -
Pral2819g00017 1141 Gene3D Ribonuclease Inhibitor 348 540 IPR032675 -
Pral2819g00017 1141 Gene3D Ribonuclease Inhibitor 552 770 IPR032675 -
Pral2819g00017 1141 CDD STKc_IRAK 868 1136 - -
Pral2819g00017 1141 PRINTS Leucine-rich repeat signature 434 447 - -
Pral2819g00017 1141 PRINTS Leucine-rich repeat signature 671 684 - -
Pral2819g00017 1141 Pfam Protein kinase domain 865 1063 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2819g00017 1141 SUPERFAMILY L domain-like 580 760 - -
Pral2819g00017 1141 SUPERFAMILY RNI-like 136 484 - -
Pral2819g00017 1141 Pfam Leucine Rich Repeat 264 286 IPR001611 GO:0005515
Pral2819g00017 1141 Pfam Leucine rich repeat 170 229 IPR001611 GO:0005515
Pral2819g00017 1141 Pfam Leucine rich repeat 649 708 IPR001611 GO:0005515
Pral2819g00017 1141 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 826 937 - -
Pral2819g00017 1141 ProSitePatterns Serine/Threonine protein kinases active-site signature. 982 994 IPR008271 GO:0004672|GO:0006468
Pral2819g00017 1141 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 247 482 - -
Pral2819g00017 1141 SMART LRR_typ_2 671 694 IPR003591 -
Pral2819g00017 1141 SMART LRR_typ_2 623 647 IPR003591 -
Pral2819g00017 1141 SMART LRR_typ_2 310 334 IPR003591 -
Pral2819g00017 1141 SMART LRR_typ_2 262 286 IPR003591 -
Pral2819g00017 1141 SMART LRR_typ_2 695 718 IPR003591 -
Pral2819g00017 1141 SMART LRR_typ_2 168 191 IPR003591 -
Pral2819g00017 1141 SMART LRR_typ_2 192 216 IPR003591 -
Pral2819g00017 1141 ProSiteProfiles Protein kinase domain profile. 862 1136 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2819g00017 1141 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 520 762 - -
Pral2819g00017 1141 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 938 1140 - -
Pral2819g00017 1141 Gene3D Transferase(Phosphotransferase) domain 1 938 1139 - -
Pral2819g00017 1141 Gene3D Ribonuclease Inhibitor 43 242 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2819g00017 Pral-Chr2819 70327 74261 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2819g00017 44 1141 Receptor kinase-like Gene Family AT3G02130 67.413 0.0 1415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Pral2819g00017 Pkinase 7.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2819g00017 - - gmx:100803891 1684.46