Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2819g00011 ATGATTAAGATTCCAAAAGAGGCAGATCTTGCAAGAAAACATGAAGGTGATTCGTCAAGTAATTATGAGAAAGCAAAGGCATCGACATCATCATGGAGCAGCATGGAGCAGCAATGGGTGAGGTTGAAGGATCCGAGGATAGTGAGAGTAGCAAGAGCCTTCGGAGGCAAAGACAGGCACAGCAAGGTTTGCACCATACGCGGTTTGAGAGACAGAAGAGTGAGGCTGTCGGTACCCACAGCCATTCAATTATATGACCTTCAAGAGAGGTTAGGGTTCAATCAACCCAGTAAGGTTATTGATTGGCTTCTTAATGCTGCCAAGAATGACATTGATGAACTGCCTCCTCTTCCACCATTAAATCTGGCCCTCGTTCATCATCATGCTATTCTCACCTCTAATTCTCAGCCTAACGAAGAACATGGGTGGGAAGCTAACAATAACACTTTCTGGAAACTGATGGAGCCCAAAGAAGCTTCCCTGTCGCATGATCACGAGGACAAAGTTGGTGATGATGATGTTAAACGAGGAAGCAATAATAATGATACTGAGTTATCTCATCTTCCGCATCACCATCATCATCATCCCTCCTTTGTTGGGTACCAGTGGGAAGGTTCTGTATCAGATGGTGCTGGTAGTGGTGGAGGTGTACATGTTTCTCATCAGACAGATTTGCAAAGCCTTAGCGTTTTACCTTCCTCATCAACTTTGTCTTTGTCCACTGGGGATTCTTCTCATCATCATTTTCCTTCGCATTTTGGAGCGAATATGGATATGGATAGTAATATTCCTAAACAACTCAACTATAACCATCACTATCCTATGCTCAGTTCTAGTTCAAATAATCTGTACCCTATCTCCATGGCACAATCCTTGAAACCCTTTGGGTTGAGCATGATGACTCCCAACAGCACTTCAGAGAGCCAGTCACATAACCACCTTCAGAATTTTCCCACCAAGTGA 963 0.4382 MIKIPKEADLARKHEGDSSSNYEKAKASTSSWSSMEQQWVRLKDPRIVRVARAFGGKDRHSKVCTIRGLRDRRVRLSVPTAIQLYDLQERLGFNQPSKVIDWLLNAAKNDIDELPPLPPLNLALVHHHAILTSNSQPNEEHGWEANNNTFWKLMEPKEASLSHDHEDKVGDDDVKRGSNNNDTELSHLPHHHHHHPSFVGYQWEGSVSDGAGSGGGVHVSHQTDLQSLSVLPSSSTLSLSTGDSSHHHFPSHFGANMDMDSNIPKQLNYNHHYPMLSSSSNNLYPISMAQSLKPFGLSMMTPNSTSESQSHNHLQNFPTK 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2819g00011 320 MobiDBLite consensus disorder prediction 1 21 - -
Pral2819g00011 320 MobiDBLite consensus disorder prediction 159 220 - -
Pral2819g00011 320 MobiDBLite consensus disorder prediction 299 320 - -
Pral2819g00011 320 Pfam TCP family transcription factor 56 155 IPR017887 -
Pral2819g00011 320 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 30 285 IPR005333 GO:0003700
Pral2819g00011 320 MobiDBLite consensus disorder prediction 1 29 - -
Pral2819g00011 320 ProSiteProfiles TCP domain profile. 56 114 IPR017887 -
Pral2819g00011 320 MobiDBLite consensus disorder prediction 159 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2819g00011 Pral-Chr2819 35927 38285 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2819g00011 39 140 TCP Transcription Factor Family AT3G02150 70.476 1.50e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Pral2819g00011 TCP 7.3e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2819g00011 - - pcin:129304766 462.611