Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2817g00001 ATGTCGAGCTCCTCGGATTTTCCCGGCCCGAAGCCGGCCACGTCGCCGGAGAAGCCTTCTTTCTCCCAGACTTGCAGTCTGCTGAGTCAGTACCTGAAGGAGAAGGGCAGCTTTGGTGATCTTGCCCTTGGGATGACGCGGGGCACCCAAGCAATCGGGTCAACTGAAGCATCTTGTCAGACTGCGACGACCATGGACTTATTTCCACCTAAGGAAAACACACAGGATTTACCCTCTAATTCCAGTGTTCCTAAGCCAGTGACTAAGGATCCTAAAGCTTCACAACTGACCATCTTTTATGGCGGACAAGTAATTGTTTTCGATGATTTTCCGGCCGAGAAAGCCAAGGAGATCATGTCTTTTGCCAGCAAAGGAAACACCCAAAGCCAGAACCCCTCTGTTTACACTTTTGCTCAGAGCGCACCTTCGTTTCCTGCTAATTTGGCCAGAACCTCCGCTGATCCGAGCGCTTCAATCACTCCTCATCCTCAACCACCGTCCAGACCTGTTACTTGTGATCTACCTATTATGCGTAACGCATCGCTTCACCGGTTCTTGGAGAAGAGAAAGGATAGAATTGCTGCCAAAGCACCATATCAAGGAAGCAAGCCCACAGTGGGTCCTAGCAAGCCAGTGGAGTCAATGCCGTGGCTGGGCGTAGCTGCTAAATCACCACAAAACTGA 684 0.5088 MSSSSDFPGPKPATSPEKPSFSQTCSLLSQYLKEKGSFGDLALGMTRGTQAIGSTEASCQTATTMDLFPPKENTQDLPSNSSVPKPVTKDPKASQLTIFYGGQVIVFDDFPAEKAKEIMSFASKGNTQSQNPSVYTFAQSAPSFPANLARTSADPSASITPHPQPPSRPVTCDLPIMRNASLHRFLEKRKDRIAAKAPYQGSKPTVGPSKPVESMPWLGVAAKSPQN 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2817g00001 227 SMART tify_2 89 124 IPR010399 -
Pral2817g00001 227 MobiDBLite consensus disorder prediction 66 90 - -
Pral2817g00001 227 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 17 206 IPR040390 -
Pral2817g00001 227 MobiDBLite consensus disorder prediction 66 88 - -
Pral2817g00001 227 MobiDBLite consensus disorder prediction 1 22 - -
Pral2817g00001 227 MobiDBLite consensus disorder prediction 193 227 - -
Pral2817g00001 227 Pfam tify domain 91 123 IPR010399 -
Pral2817g00001 227 MobiDBLite consensus disorder prediction 151 171 - -
Pral2817g00001 227 ProSiteProfiles Tify domain profile. 89 124 IPR010399 -
Pral2817g00001 227 Pfam Jas motif 175 200 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2817g00001 Pral-Chr2817 3983 5971 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2817g00001 1 223 Tify Gene Family AT1G19180 41.264 1.88e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Pral2817g00001 tify 3.9e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2817g00001 K13464 - gmx:100801449 279.256