Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2816g00003 ATGGCTTCAAATCAACAAGTGAAGCTTTTCGGATTCTTGGGAAGCCCATTTGTGGCGAGAGCAGAGCTTGCTCTGAAACTCAAGGGAGTGGAATATGAGTACATTCAGGAACCGTTGCCGAACAAAAGTGATCTTCTTCTCAAGTACAACCCAGTTCACAAGAAGGTCCCCGTGCTTCTTCACAACGAGAAACCAATCTGTGAGTCGCTTTTGATTGTTGAATACGTCGATGAGGCTTGGACTGGCTCCCCCATCTTGCCTTCTGATCCTTATGACAGGGCCACGTCTCGTTTCTGGTCTAGGTTCATCGATGACAAGTTGTTACCTGCAGCATTCAAAGCAGCCTGGGATTCAGACGTGAAGGAGAGGGAAAAAGGTGCTGAAGAATCGAGAGAGGCTCTGAATGTTCTGGACAAGGAGCTGAAAGTGAAAGGGAAGTTCTTCACTGGAGATTCATTTGGGTATTTGGAAATCGCTGCTCTGATCATCACTTACTGGCTGCCCATAATCCAAGAAGCTAGTGAGGTCGACCTGTACAGTGCTGAGAGATATCCAAATTTAGAGAAATGGGGTCAAGAGATTTTGAAAGAGCCCGCTGTGCAAGCAGTTTTGCCTCCCAGGGATGTTCTGCTTACCTTCTTCAAGAATCGCTATCAGAGCATCCCAAGTCCAGCCATGGCTTCAAATCAACAAGTGAAGCTTTTCGGAATCGTGGGAAGCCCATTTGTGACGAGAGCAGAGATTGCTCTGAAACTCAAGGGAGTGGAATATGAGTACATTCATGAATCCTTAACGAACAAAAGCGATCTTCTTCTCAAGTACAACCCAGTTCACAAGAAGGTCCCTGTGCTTCTTCACAACGAGAAGCCCGTCTGTGAGTCTCTTGTGGTTGTTGAATACGTCGATGAGGCTTGGACTGGCTACCCCATCTTACCTTCTGATCCTTATCAAAGAGCCCTGGCTCGTTTCTGGTCTAAGTTCATCGATGACAAGTTGTTGCCCGCGGTATTTAAAGCAGCGTGGAACCCAGACGTGAAGGAGAGGGAAACGGGAGCTGAAGAAGCAAGAGAGGCTCTGAAAATTCTGGACAACGAGCTGAAAGGGAAGTTCTTTAATGGAGATTCAATTGGGTTTCTGGACATCGCTGCTCTGTTCGTCGCTTTCTGGATGCAGCTAATTCAAGAAGCGGGTGGGCTGGATCTGTACAGTGCTGAGAGATATCCAAAGCTAGAGAAGTGGGGTCAAGAGATTTTGAACCACCCAGTTGTGAAAGGAGTTTTGCCTCCCAGAGAACATCTCCTCGCCTTCTTCAAAACTCGCTTTCAGAGCATCGCTGCTTCAAAGTAG 1347 0.4729 MASNQQVKLFGFLGSPFVARAELALKLKGVEYEYIQEPLPNKSDLLLKYNPVHKKVPVLLHNEKPICESLLIVEYVDEAWTGSPILPSDPYDRATSRFWSRFIDDKLLPAAFKAAWDSDVKEREKGAEESREALNVLDKELKVKGKFFTGDSFGYLEIAALIITYWLPIIQEASEVDLYSAERYPNLEKWGQEILKEPAVQAVLPPRDVLLTFFKNRYQSIPSPAMASNQQVKLFGIVGSPFVTRAEIALKLKGVEYEYIHESLTNKSDLLLKYNPVHKKVPVLLHNEKPVCESLVVVEYVDEAWTGYPILPSDPYQRALARFWSKFIDDKLLPAVFKAAWNPDVKERETGAEEAREALKILDNELKGKFFNGDSIGFLDIAALFVAFWMQLIQEAGGLDLYSAERYPKLEKWGQEILNHPVVKGVLPPREHLLAFFKTRFQSIAASK 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2816g00003 448 CDD GST_C_Tau 315 440 IPR045074 GO:0004364|GO:0006749
Pral2816g00003 448 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 5 84 IPR004045 -
Pral2816g00003 448 SUPERFAMILY GST C-terminal domain-like 303 443 IPR036282 -
Pral2816g00003 448 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 314 441 IPR010987 -
Pral2816g00003 448 Gene3D Glutaredoxin 226 313 - -
Pral2816g00003 448 Gene3D Glutaredoxin 1 88 - -
Pral2816g00003 448 FunFam Glutathione S-transferase GSTU6 227 311 - -
Pral2816g00003 448 CDD GST_C_Tau 90 215 IPR045074 GO:0004364|GO:0006749
Pral2816g00003 448 CDD GST_N_Tau 232 305 - -
Pral2816g00003 448 SUPERFAMILY Thioredoxin-like 6 108 IPR036249 -
Pral2816g00003 448 FunFam Tau class glutathione S-transferase 86 223 - -
Pral2816g00003 448 SFLD Main.3: Omega- and Tau-like 229 447 IPR045073 -
Pral2816g00003 448 SFLD Main.3: Omega- and Tau-like 4 223 IPR045073 -
Pral2816g00003 448 SUPERFAMILY Thioredoxin-like 231 333 IPR036249 -
Pral2816g00003 448 SUPERFAMILY GST C-terminal domain-like 78 220 IPR036282 -
Pral2816g00003 448 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 225 IPR010987 -
Pral2816g00003 448 Coils Coil 345 365 - -
Pral2816g00003 448 Gene3D - 89 223 - -
Pral2816g00003 448 Gene3D - 314 448 - -
Pral2816g00003 448 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 230 309 IPR004045 -
Pral2816g00003 448 Pfam Glutathione S-transferase, N-terminal domain 6 78 IPR004045 -
Pral2816g00003 448 Pfam Glutathione S-transferase, N-terminal domain 231 303 IPR004045 -
Pral2816g00003 448 FunFam Tau class glutathione S-transferase 311 447 - -
Pral2816g00003 448 SFLD Glutathione Transferase (cytosolic) 229 447 IPR040079 -
Pral2816g00003 448 SFLD Glutathione Transferase (cytosolic) 4 223 IPR040079 -
Pral2816g00003 448 CDD GST_N_Tau 7 80 - -
Pral2816g00003 448 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 235 432 IPR045073 -
Pral2816g00003 448 FunFam Glutathione S-transferase GSTU6 2 86 - -
Pral2816g00003 448 Pfam Glutathione S-transferase, C-terminal domain 332 421 IPR004046 -
Pral2816g00003 448 Pfam Glutathione S-transferase, C-terminal domain 115 198 IPR004046 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2816g00003 Pral-Chr2816 34972 41948 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2816g00003 226 447 Glutathione S-transferase Gene Family AT3G09270 50.222 2.32e-77 238
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2816g00003 K00799 - egt:105969932 424.476