Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2815g00003 ATGATCGTGGACATGGGTGGGAACCCTAATTTGTGGAGCAATATGCATGACGCTGCTTATGTTCTTGGATCTTCCATTCCTTTCAATCCGATCCCTCAAAACTCCGAGCCTCGTCCTTCCACCTGGAGCCAACTCGTCTTCTCAGGAGCACCAGGAGAAGAGAAGAGACTGAGTTTTGATCATTTTGAAGCAAAAAGGTTGGGCAGGTGGGAAGAACAAGTTCTGAATCCATCCCTGTCGAGATTTCATGTCGACGAAGGAATAATAAAGCAACAGGGTTGCCTGTACGGCAGCCATGGCGGTGGTGGTGAGGAATTTCAGGGTACTCATTCTTCATCTGCAGGTGGGTCAGTAGTAGCTAATTGGTCACACATGGCGGGTCCTGTTTCTTCTTCCCCTAGGTCGTCCTGCGTCACTAGCTTGACTAGTAGTAATAATAACTACAACACTGTATGGGATTCTTTCTCTTATAAGAAGGCCGACACTAAGAAAAATTATCTCCCTGCCGCAGATCACTCATCTGAGTGTAGCACAGCCACTGGGGGAATCTGTAAGAAGGCTAGGGTTCAACCAACTTCAAGCCACCCTCCTCTCAAGGTGAGGAAGGAGAAGCTGGGGGATAGAATATCAGCCCTTCACCAACTGGTTTCTCCTTTTGGAAAGACTGACACAGCTTCAGTGTTGTTCGAAGCCATTGGATATATCAGATTCCTTCATGGTCAAATTGAGGCTCTCTGTTTTCCTTATTTCGGAAATTCATCAAAACACTTGAGGAATCATCACTTTGTGAATCATGGAGAGAGAAATTCCGTATTCCCAGAGGACCCTGGACAGCTCTTGAATAATGATGCTTCACTCAAAAGAAATGGAGCTTCAATTGCAAACCAGGAAAATGGAGAAGAAAAGGCAAAGGACTTGAGAAGCAGAGGATTATGTTTGGTGCCAATATCTGTGAGCCACCATTTTGGAAGTGATCATAATAATATCGGAGCTGATTTTTGGTCATCCACTTACCGCAGCGGTTTTTAA 1029 0.4529 MIVDMGGNPNLWSNMHDAAYVLGSSIPFNPIPQNSEPRPSTWSQLVFSGAPGEEKRLSFDHFEAKRLGRWEEQVLNPSLSRFHVDEGIIKQQGCLYGSHGGGGEEFQGTHSSSAGGSVVANWSHMAGPVSSSPRSSCVTSLTSSNNNYNTVWDSFSYKKADTKKNYLPAADHSSECSTATGGICKKARVQPTSSHPPLKVRKEKLGDRISALHQLVSPFGKTDTASVLFEAIGYIRFLHGQIEALCFPYFGNSSKHLRNHHFVNHGERNSVFPEDPGQLLNNDASLKRNGASIANQENGEEKAKDLRSRGLCLVPISVSHHFGSDHNNIGADFWSSTYRSGF 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2815g00003 342 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 199 249 IPR036638 GO:0046983
Pral2815g00003 342 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 59 320 - -
Pral2815g00003 342 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 189 238 IPR011598 GO:0046983
Pral2815g00003 342 CDD bHLH_AtbHLH_like 199 245 IPR045239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2815g00003 Pral-Chr2815 19456 24293 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2815g00003 52 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 40.945 1.21e-35 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2815g00003 - - gmx:100802121 310.457