Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2804g00001 ATGGTGAAGCAGATCGCCGATGAGCCCACGGAACGAAGCGATTCTAAGTTCAGAGGTGTTCGGAAGAGGAAGTGGGGCAAGTGGGTTTCCGAAATTAGACTACCTAACAGCAGGGAGAGGATCTGGTTGGGATCTTATGACTCCGCCGAGAAGGCGGCGCGCGCTTTTGACGCCGCCATGTTTTGCTTACGTGGCCGCTCCGGTAACTTTAATTTCCCCGATAATCCCCCCGAAATCGCCGGGGGCAGGTCTATGTCCCCCGCTCAGATCCAAGCCGCCGCGGCCCGTTTTGCCAATTCGGAGCCCGGGGCGGGTCGCTCAGACAAACCCGTGACCCCCCGACAATTGCAGGAGGAGTCTCGGTCTCGCTCACTTTCTGAAGCGACAGCTGTGCCCGTGGAATCTCCATCACCCTCGCTTTCTGAGGTGACGTTGCAAACGGACAGTGAAATGACACTAAAAGAATCGGTCCCGGACCTTTTTAAGACAACCGGATCGGGTAATTACGCGAATGAATACGGGATATTCGCGGGGTTTGACGATCTAGCCAGTGAGTTCTATATACCAGAAATGCCGAGTGTGAATTACGAGGAAGAAAACATGGATTATGGGTTGCTAATTGACGACTCATTCCTGTGGAATTTTTAA 648 0.5324 MVKQIADEPTERSDSKFRGVRKRKWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAAMFCLRGRSGNFNFPDNPPEIAGGRSMSPAQIQAAAARFANSEPGAGRSDKPVTPRQLQEESRSRSLSEATAVPVESPSPSLSEVTLQTDSEMTLKESVPDLFKTTGSGNYANEYGIFAGFDDLASEFYIPEMPSVNYEEENMDYGLLIDDSFLWNF 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2804g00001 215 FunFam Ethylene-responsive transcription factor 2 15 74 - -
Pral2804g00001 215 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Pral2804g00001 215 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Pral2804g00001 215 Pfam AP2 domain 15 65 IPR001471 GO:0003700|GO:0006355
Pral2804g00001 215 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Pral2804g00001 215 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Pral2804g00001 215 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
Pral2804g00001 215 MobiDBLite consensus disorder prediction 94 142 - -
Pral2804g00001 215 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 13 148 - -
Pral2804g00001 215 Gene3D AP2/ERF domain 15 74 IPR036955 GO:0003700|GO:0006355
Pral2804g00001 215 MobiDBLite consensus disorder prediction 117 142 - -
Pral2804g00001 215 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2804g00001 Pral-Chr2804 12528 13401 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2804g00001 15 215 AP2-EREBP Transcription Factor Family AT1G19210 46.262 9.45e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral2804g00001 AP2 8.4e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2804g00001 - - gmx:732656 255.373