Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2801g00004 ATGGACATTGGCGAACCATCGTCATCGTGCATCATAGTAGCTGAATTGCCCACCCTCCGGGAACTCTTCCAGCTCGAAGATGACGCAGAGAGGGAAGCCGCCGGCTACGACAGTATCGCGACGGAGTACCACACGCCTGAACGGACTGATTCCAGTATCGTGCCAGCTCGCTCGTCGTCTTTTGCGCTCACATTCAATAATCTCACATACAGTGTGAAGGTCCGCCAGAGAATGAACTTCTCAGCGTGGTTCCCGCAACAAAGGAATAACCGTCTCGGAGCACCAGAAACTAAGATTCTTCTGAATGATATCTCCGGCGAGGCTCGCGACGGTGAGATTCTTGCCGTTATGGGAGCTAGTGGTTCAGGGAAATCCACTCTGATTGACGCCTTGGCCAACCGAATAGCTAAAGGCAGCTTGAAAGGGAGCGTGAGATTGAACGGCGAGGCCTTAGAATCGCGGCTTCTGAAAGCAATTTCAGCCTATGTAATGCAAGATGACCTTCTCTTTCCGATGCTCACAGTGGAAGAGACTCTAATGTTCGCAGCTGAATTCCGATTACCATGCAGTCTCTCTAGATCCAAGAAGAAGATGCGAGTACAAGCTCTGATCGACCTGCTCGACCTCAGAAACGCAGCGAAAACCGTCATCGGCGATGAAGGCCACCGTGGTGTGTCCGGCGGCGAACGACGGCGTGTCTCCATCGGCATTGATATAATCCACGACCCGATCATATTGTTCCTCGATGAACCTACATCGGGACTGGATTCCACGAGCGCATTCACGGTGGTGAAGGTCTTGCAGACAGTTGCACACACCGGAAGCATCGTCGTCATGGCCATCCACCAACCGAGTTCGCGAATTCTTGGTCTTATCGACAGAATAATCTTCTTATCTCGCGGGGAAATTGTGTTCAGTGGTTCGCCTATGCAGCTTCCCCACTTCTTCGCTGAATTTGAACACCCAATTCCAGAAAATGAGAACCAAACCGAGTTTGCATTGGACCTGATTCACGAGCTAGAAGAGGGGTCATCTAGTGGAACTCATAGATTGGTGGAATTTAACAAGTCGTGGCAGAGCAAGAAGCAGTCGGGAAGTAACAGTGGCCTATCAGAAGGTGAATATCACCATGGATTATCATTGAAAGAAGCGATCAATACAAGCATGTCGAGGGGAAAACTAGTGTCAGGAATCACAAAAACAAGTGATAATAACGCAGTAATAAGATCATCATCAACTTCAAAGGTACCAACATTTGCGAACCCAATGTTGATCGAAGTGGCAAAGCTCTCAATACGATCATACACCAATTCACGAAGAACGCCTGAAATATTCCGGACCCGGTTGGCCATAGTACTCATCACTGGCTCACTTTTAGCTTCAGTGTTTTGGCGTTTAGATGATTCTCCAAAAGGGGTTCAAGAAAGGCTTAGCTTCTTCGCTTTCGCCATGTCTTCCACCTTCTACACAACAGCAGAAGCTCTCCCTTTGTTCCTTCAAGATCGATACATTTTCATGAGAGAAACTGCTTACAACACTTACCGTAGATCCTCTTACATCGTCTCTCACGCTCTTGTGTCCTTACCTTCTTTGCTTGTCCTCTCATTAGCTTTCGCAGCGACGACGTTTTGGGCGGTGGGGCTTGATGGAGGATGGTTGGGTTTCTTGTTCTATTTCGTCTTCATGTTTGCTTCTTTCTGGGCAGGTAATTCCTTCGTCACCTTCCTGTCTGGTGTGCTACCTCACGTGATGGTGGGATATACCATAGTGGTGAAGTCCTTAGCATATTTCTTGCTGTTCAGTGGATTCTTCATTAACAGAGACAGAATTCCAGTTTATTGGATTTGGTTTCACTACTTGTCTTTGGTGAAATACCCATATGAAGCTGTGATGCAGAACGAGTTTGATGACCCAGTGAGTTGCTTTATGAGAGGGGTTCAGGTTTTCGATAACACTCCACTCGGCGAGTTGCCGGGTTCCGTGAAACTGAAGCTATTACAGAGCTTGAGTGCTACATTAGGAACGAATATAACGAGCTCAACGTGCTTGACGAGAGGCAGTGATATATTGCAGCAGAATGGGATAACTCAGCTAAGCAAATGGAACTGTTTGTGGGTAACAGTGGGTTGTGGATTTTTGTTTAGGGCTCTGTTTTACTTCTCGTTGTTACTAGGGAGCAAGAATAAGAGGAGATAA 2196 0.4736 MDIGEPSSSCIIVAELPTLRELFQLEDDAEREAAGYDSIATEYHTPERTDSSIVPARSSSFALTFNNLTYSVKVRQRMNFSAWFPQQRNNRLGAPETKILLNDISGEARDGEILAVMGASGSGKSTLIDALANRIAKGSLKGSVRLNGEALESRLLKAISAYVMQDDLLFPMLTVEETLMFAAEFRLPCSLSRSKKKMRVQALIDLLDLRNAAKTVIGDEGHRGVSGGERRRVSIGIDIIHDPIILFLDEPTSGLDSTSAFTVVKVLQTVAHTGSIVVMAIHQPSSRILGLIDRIIFLSRGEIVFSGSPMQLPHFFAEFEHPIPENENQTEFALDLIHELEEGSSSGTHRLVEFNKSWQSKKQSGSNSGLSEGEYHHGLSLKEAINTSMSRGKLVSGITKTSDNNAVIRSSSTSKVPTFANPMLIEVAKLSIRSYTNSRRTPEIFRTRLAIVLITGSLLASVFWRLDDSPKGVQERLSFFAFAMSSTFYTTAEALPLFLQDRYIFMRETAYNTYRRSSYIVSHALVSLPSLLVLSLAFAATTFWAVGLDGGWLGFLFYFVFMFASFWAGNSFVTFLSGVLPHVMVGYTIVVKSLAYFLLFSGFFINRDRIPVYWIWFHYLSLVKYPYEAVMQNEFDDPVSCFMRGVQVFDNTPLGELPGSVKLKLLQSLSATLGTNITSSTCLTRGSDILQQNGITQLSKWNCLWVTVGCGFLFRALFYFSLLLGSKNKRR 731
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Pral2801g00004 731 Pfam ABC-2 type transporter 430 635 IPR013525 GO:0016020|GO:0140359
Pral2801g00004 731 Coils Coil 727 731 - -
Pral2801g00004 731 FunFam ABC transporter G family member 6 90 316 - -
Pral2801g00004 731 Pfam ABC transporter 101 253 IPR003439 GO:0005524
Pral2801g00004 731 CDD ABCG_EPDR 63 307 - -
Pral2801g00004 731 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 50 717 - -
Pral2801g00004 731 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 63 325 IPR003439 GO:0005524
Pral2801g00004 731 ProSitePatterns ABC transporters family signature. 225 239 IPR017871 GO:0005524|GO:0016887
Pral2801g00004 731 Gene3D - 88 317 IPR027417 -
Pral2801g00004 731 SMART AAA_5 110 302 IPR003593 GO:0016887
Pral2801g00004 731 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 97 316 IPR027417 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Pral2801g00004 Pral-Chr2801 40930 44128 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2801g00004 95 302 Calmodulin-binding Proteins AT2G36910 27.556 2.38e-11 65.5
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2801g00004 K05681 - zju:107413578 977.237