Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral27g00045 ATGGCAGCTCTCTATGATCCTGTTTGCGAAATCAATCCTTCTCGATGTAATTGGCGCATTATGGTTCGGATAGCACTGGGCGATATTGATGAGTGTGAAGTTAATGGGTGCAAACATCGAAGGGTGGACATAAAGCTTATTAATGAGGAAATGGAGCATTTAGATTGCACTCTTTGGGGCGCATTTGCGGATGCTATATGTGAGTTTGCATTCTCCTTGGAGTCGGAACCTGTGATAATTATCATACAGATGTGCAAAGTCCGCAAGTTTCATGGGAGGTCTACAATATCAAATTCAATATTTTCATCCCGGCTTTTTATCAATCCTTCAATTCCCGAGGTTGATAATTTTATTACCAAGTTAAAATCTGTGGGCATAGATATCAATGAAGCTCCCACACGCATCGTGCCACAGCCCATTAACTTTATTGCAGATGAAATGTTGAGTATGGCTGATCGGCGAAAGATTTCAGAGCTAAGTTCAGCACCTATTGATACAGTTGTGTTAGTTCTTGCTGACATAGTTGGTATCTGTTTTGATCGTGGATGGTATTATTACTGCTGTAAAAACTGTGACAGAAGGGTTGTGACAGATGGCTGCGGATTTTATTGCCCAAATTGCTCTCAAATAATAGAGACTGCATTTCCTAAATTTATGGTGCACTGCAAAGTTAAGGATGAGTCTGGTACATGCACTTTTGTTATTTTTGATCGTGAGTTCAGTAGATTGGTGGGATGTTCAGCTGCCGAAATGCAAGACCGTGTCCTTTATGAGAGTTTATCGTTTGGAGTTGATCCATGTGACACCCTCCCTGTTGGAATAGTAGAAAAGATTATGGGACATAAACACCTTTTCAAAGTGCGCGTTTCCCATGAATTTGTCATGGGTCGATCAGCAAAATGCAGTGTAATGAGGATGACCAACAACAGTGATATAATAAAGCTGCATTTGGATACAATTGATGGCGACATGGGATTACAGTTAGGTGCTGAGAATCTGAACCTTAAAGATAATGAAATACAAGCATCATTGATGGGTTCTGATGAGAAGAGTGCACGCGATATTTCAGATAATACATAG 1080 0.4037 MAALYDPVCEINPSRCNWRIMVRIALGDIDECEVNGCKHRRVDIKLINEEMEHLDCTLWGAFADAICEFAFSLESEPVIIIIQMCKVRKFHGRSTISNSIFSSRLFINPSIPEVDNFITKLKSVGIDINEAPTRIVPQPINFIADEMLSMADRRKISELSSAPIDTVVLVLADIVGICFDRGWYYYCCKNCDRRVVTDGCGFYCPNCSQIIETAFPKFMVHCKVKDESGTCTFVIFDREFSRLVGCSAAEMQDRVLYESLSFGVDPCDTLPVGIVEKIMGHKHLFKVRVSHEFVMGRSAKCSVMRMTNNSDIIKLHLDTIDGDMGLQLGAENLNLKDNEIQASLMGSDEKSARDISDNT 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral27g00045 359 Gene3D - 144 320 IPR012340 -
Pral27g00045 359 CDD RPA1_DBD_B_like 22 122 - -
Pral27g00045 359 SUPERFAMILY Nucleic acid-binding proteins 152 308 IPR012340 -
Pral27g00045 359 SUPERFAMILY Nucleic acid-binding proteins 27 126 IPR012340 -
Pral27g00045 359 Gene3D - 20 127 IPR012340 -
Pral27g00045 359 Pfam Replication factor-A C terminal domain 173 306 IPR013955 -
Pral27g00045 359 PANTHER OS03G0429900 PROTEIN 39 292 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Pral27g00045 359 CDD RPA1_DBD_C 157 321 IPR047192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral27g00045 Pral-Chr27 866051 868341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral27g00045 43 251 Core DNA Replication Machinery Family AT5G61000 26.047 4.03e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral27g00045 - - pcin:129299041 219.55