Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral27g00040 ATGCAGGCAATCTGTTTGATATTCTTCTTGTATGGAGTGATTGCGTTAGGGAATTCAGATATTGATGCACTACTTGAACTCAAGAAGAGCATTCAGAATGACCCTTCTGGACTACTTAATTCTTGGGATACCAGATCTTTGGCTTCTGATGGATGTCCTCAGAATTGGTATGGGATATCGTGTGCTGGAGGCAATGTTATATCGATAACTCTGAATAATGCTGGTTTGGTTGGACAGTTTAATTTCCTTGCCATTAATGGCCTTAAAAAGCTTCAAAACCTGTCACTGTCCAACAACCAGTTCAAGGGAAGTGTCTCACATTTTGGTCCAATGGAATCACTAGAATTTCTTGATCTTTCAGTCAACAAGTTTCATGGGGTGGTACCCTCTGACTTGCTTGAATTACATAATATAGTGTATTTAAATCTTTCATCAAATCAATTGGATGGTACAGTTCCTGTAGGCTTTGACAAACTCAACCGGATGAAGTATTTAGATTTGTGCTCTAATAACTTTTCTGGGGATATTATGCATATCTTTTCTCATATGGGTGGCGTGGTTCATGTTGACCTAAGCACCAACAGGTTTTCTGGTTCACTAGATTTGGGACTTGTAAACAGCACTTTTCTCTCCTCGATTCAGTATTTAAATGTCAGCCACAATTCCTTGACTGGTGATCTGTTTGCTCATGATGGGATGCCATACCTTGACAGTTTAGAGGTCTTTGATGCTAGTAATAATCAGTTAGTGGGTAATATACCTTCCTTCACATTTGTGGTATCTCTAAGGATTCTTCGGCTTGGTTGCAACCAGTTATCTGGTTCTCTTCCAGAAGGTCTATTGAAGGAGAGTTCAATGATGTTGTCTGAACTGGATCTTAGTCAAAACAAGCTTGAAGGTCCTGTTGGAAGCATTACTTCTGTAACTTTGAAGAAGCTTAATTTATCTTCAAACAATCTGTCAGGCCCCTTACCTTTCAAGGTGGGCCACTGCGCCATAATAGATTTAAGTAACAACATGCTATCAGGGAACTTGTCAAGAATTCAGTATTGGGGCAATTATGTGGAGGTGATTCAGCTTAGTTCAAATTCATTGACAGGAACGCTTCCTAATCAAACTACACAATTTTTGAGGGTGACTGAACTTAAGATATCTAATAACTCATTAGAGGGCAGTCTCCCTTCAGTCTTAGGAACATACCCAGAACTAAAAGAGATTGATCTTAGCCACAACCTACTTTCTGGGGTCCTCCTTCTGAGCTTTTTCACCTCAACCAAATTGACTGTGCTTAACCTCTCACACAACAACATTTCTGGATCAGTATATTTTAAAGAAATTCCAAATAACCTGCTAGTTTTTGCTGAAAATTCTAGTCTTGTGTCTGTTGATCTCTCATACAACAACTTGAGTGGGCATCTACCTACAGAAATAGGTAAGCTTCACAAGTTGGCAAGTCTCAATCTATGTAACAACAAATTTGAAGGTATCATTCCTGATGATCTTCCTGATCAACTGAGAGAATTCAACGTGTCCTTCAACAATTTTTCTGGCATTGTGCCTGATAAATTAATGAAGTTTCCCGAATCAGCATTTCACCCAGGAAATTCTTTTCTGATCTTTCCTCATTCGCTTGCTTCACCAGAAGATGGTGGTGAACTAGGTTTGAAGGGAAAGAGGCCACATATAAAACCTGCAACCAAGATTGCCTTGATTGCCAGTTTGGTTTCTGGTGCTTTTGTCATGGCCCTTTTGAGTGTAGTCAGTTTTTATAGGGTTCGCAGGCAAAAAGAAACAACTACACATGAAAATAGACCGAAAGATATTGCTCATCAGAGTTCTTCTCCATCTGGTAGTGAAGTACCTAACAGAAACTTAGAAGCAATTTCTTCAACCCAGAAGGAGGCTGATGATGTCAGAAATGTTCATACTGCTGTAGAGAAACCAGAAGATCTTGACTTTTTTGAATTAGTTAAGCATGAGGAGGGGATATCATCTCCAATGTCTTTTCTGTCATTTTCAAATCCTTCATCTTCTAGAAGCCACCCGTTTGAGAATCCTGGTGCTCTTAAAATATGCTCACCGGATAAATTGTTTGGGGATTTGAATATGTTTGATGGGGCCTTGGAGCTCACTGCAGAAGAATTTTCTAGCGCTACAGCAGAAATTATTGGTAGGAGCTGTCATGGGACATTGTACAAAGCTACACTTAAATCGGGTCATGTATTGGCTGTCAAGTCATTAAAGGAAGGAATAGCCAAGAACAAGAAGGATTTTGCAAGGGAAGTTAAAAAACTTGGGACCATCAAGCATCCAAGTCTGGTTTCTCTTCAGGGTTACTACTTGGGTCCAAAGGAGACTGATAAATTCATTATATCCAAATATGTCAATGCACAATCTCTGGACTTTCATCTTCATGATGTAAGGAATGTTCATCCAATGTCTCTTGACGAAAGGTTCAGGGTGGCGATAGCTGTGGCTCAATGTCTGCATTACTTACACACTGAGAAAGCCATACCTCATGGCAATCTCAAATCCACAAACATCCTCCTTGAAATAGCTAACCCTAATGTGCTGCTCACTGACTACACCCTGCATCGGATACTAACTACCGCTGGTACTGCTGAGCAAGTTCATAATGCATGTCTTCTTGGTTACCGCCCTCCTGAGTTTGCAAGCTCAAGCAAACCATGTCCTTCCTTGAAGAGTGATGTATATGCATTTGGGGTGATCTTGTTAGAGCTTCTAACAGGAAGAAATTCTGGAGACATTGTTACAGGGATTCCCGGGGTTGTTGTCCTTGCAGACTGGGTGCAGTTTTTGGCAGAGCAAAATCGTGGCGGTGAGTGCTTTGACAGGCTGCTCTTGGACAGGCATGGTGGTGGGGAACGCCGGCCTCGAGTTCTTGATGAAATGCTCAAGGTAGCTCTTAGATGCATCCTTCCAGCATCTGAGAGGCCTGACATGCAAACTGTTTTTGAGGATCTTTCGGCATTAAGGTAG 3000 0.4103 MQAICLIFFLYGVIALGNSDIDALLELKKSIQNDPSGLLNSWDTRSLASDGCPQNWYGISCAGGNVISITLNNAGLVGQFNFLAINGLKKLQNLSLSNNQFKGSVSHFGPMESLEFLDLSVNKFHGVVPSDLLELHNIVYLNLSSNQLDGTVPVGFDKLNRMKYLDLCSNNFSGDIMHIFSHMGGVVHVDLSTNRFSGSLDLGLVNSTFLSSIQYLNVSHNSLTGDLFAHDGMPYLDSLEVFDASNNQLVGNIPSFTFVVSLRILRLGCNQLSGSLPEGLLKESSMMLSELDLSQNKLEGPVGSITSVTLKKLNLSSNNLSGPLPFKVGHCAIIDLSNNMLSGNLSRIQYWGNYVEVIQLSSNSLTGTLPNQTTQFLRVTELKISNNSLEGSLPSVLGTYPELKEIDLSHNLLSGVLLLSFFTSTKLTVLNLSHNNISGSVYFKEIPNNLLVFAENSSLVSVDLSYNNLSGHLPTEIGKLHKLASLNLCNNKFEGIIPDDLPDQLREFNVSFNNFSGIVPDKLMKFPESAFHPGNSFLIFPHSLASPEDGGELGLKGKRPHIKPATKIALIASLVSGAFVMALLSVVSFYRVRRQKETTTHENRPKDIAHQSSSPSGSEVPNRNLEAISSTQKEADDVRNVHTAVEKPEDLDFFELVKHEEGISSPMSFLSFSNPSSSRSHPFENPGALKICSPDKLFGDLNMFDGALELTAEEFSSATAEIIGRSCHGTLYKATLKSGHVLAVKSLKEGIAKNKKDFAREVKKLGTIKHPSLVSLQGYYLGPKETDKFIISKYVNAQSLDFHLHDVRNVHPMSLDERFRVAIAVAQCLHYLHTEKAIPHGNLKSTNILLEIANPNVLLTDYTLHRILTTAGTAEQVHNACLLGYRPPEFASSSKPCPSLKSDVYAFGVILLELLTGRNSGDIVTGIPGVVVLADWVQFLAEQNRGGECFDRLLLDRHGGGERRPRVLDEMLKVALRCILPASERPDMQTVFEDLSALR 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral27g00040 999 MobiDBLite consensus disorder prediction 596 622 - -
Pral27g00040 999 Gene3D Ribonuclease Inhibitor 17 201 IPR032675 -
Pral27g00040 999 SUPERFAMILY L domain-like 19 301 - -
Pral27g00040 999 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 208 450 - -
Pral27g00040 999 FunFam Nuclear pore complex protein NUP107 17 178 - -
Pral27g00040 999 PANTHER OS07G0626500 PROTEIN 9 91 - -
Pral27g00040 999 Gene3D Phosphorylase Kinase; domain 1 701 794 - -
Pral27g00040 999 Pfam Leucine Rich repeat 308 322 IPR001611 GO:0005515
Pral27g00040 999 Pfam Leucine Rich repeat 424 439 IPR001611 GO:0005515
Pral27g00040 999 ProSiteProfiles Protein kinase domain profile. 717 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral27g00040 999 FunFam Leucine-rich repeat receptor-like protein kinase 702 794 - -
Pral27g00040 999 SUPERFAMILY L domain-like 234 516 - -
Pral27g00040 999 Gene3D Ribonuclease Inhibitor 203 544 IPR032675 -
Pral27g00040 999 SUPERFAMILY Protein kinase-like (PK-like) 720 995 IPR011009 -
Pral27g00040 999 SMART LRR_typ_2 111 134 IPR003591 -
Pral27g00040 999 SMART LRR_typ_2 425 453 IPR003591 -
Pral27g00040 999 SMART LRR_typ_2 480 504 IPR003591 -
Pral27g00040 999 SMART LRR_typ_2 259 283 IPR003591 -
Pral27g00040 999 SMART LRR_typ_2 210 230 IPR003591 -
Pral27g00040 999 SMART LRR_typ_2 88 110 IPR003591 -
Pral27g00040 999 SMART LRR_typ_2 135 158 IPR003591 -
Pral27g00040 999 Gene3D Transferase(Phosphotransferase) domain 1 796 999 - -
Pral27g00040 999 Pfam Leucine rich repeat N-terminal domain 18 61 IPR013210 -
Pral27g00040 999 Pfam Protein tyrosine and serine/threonine kinase 721 918 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral27g00040 Pral-Chr27 798357 802757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral27g00040 91 998 Receptor kinase-like Gene Family AT5G07280 29.189 4.74e-69 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral27g00040 PK_Tyr_Ser-Thr 1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral27g00040 - - ccaj:109792420 1333.16