LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral27g00032	ATGGCGGAGGTGGGACTGTCGGTAGCAGCAAAACTTGCTGAATATTTGGTGCACCCAACTTTCCAGCAGTTGCAACGTTTGTTTTGTGTCAGAAAAATCACCAGAAATGTTGACATTAGGAAGGAGGAGCTAATACTGAAGCAAGGGAGAGTGCAGGAACTTGTTCAAGAGGCTATCAATAGAACTGAGAGGATTGATGATGAGGTTAACAAGTGGAAGAATGATGTGAAAAGCCTCATAGCAGAGGTGGAGAAATTAGAGGAAGGACTAAAGGCTAACCATGGCTGCCTTCGAGGGTGGTGCCCTACTTGGAAGAGATATTGTCTCTGCAAAAAGTTGGCTAAGACTGCCCAAAGGATGATTGATCTAAATACAAAGAGTGACTGCTTCAGTTCATTTTCCCATCCTGTTATTATTCCAGATATAGATTATCACTCTCCTCAAAACTTTAAGCTCTTCAACTCTACACAAAAGGCTTTTGATCAGCTGTGTGAGGCACTGCGAGATGATGGTAGCTCCATAATTGGGCTATGGGGCATGGGAGGGTCAGGGAAAACCACCCTGGTGAAAGAAGTGGGAAAGAAAGCCAAAGAGTTACAGATCTTTGATCGAGTTGTGCTTACTACAATTTCTCAAAGCCCAAATGTAAGAAAAATTCAAGGTGAAATTGCTGACACGTTGGGGCTCAAATTAAGTGAAGAATCTGAAATAGGTAGAGCAAAAAGAATAGCACTAAGATTGCAAAGTGGAGAACGAATTTTGATAATACTGGATGATGTATGGGCCATGTTGGATCTTGAGGATATAGGGATTCTCACTGGAGGAAATCATCAAAGAAGTTGCAAAGTTGTCCTGACCACACGTCGTCTAGAGGTATGTAACTTGATGGAATGCCAAAAGATGATTCAACTTCATTTGCTAAAAGAAGATGAAGCTTGGACTTTGTTTCAAACTCATGCTAGGGTTGATGATGTCGCTAAAGAAGTTGTGGTTCATGAAATTGCCATGGAATGTAAGGGCCTACCTATAGCTATTGTAGCTATGGGAACTTGCTTGAGAGGAAAAGGAGTTGATGAGATGAATGTAGCGTTGTGTCGGTTGAGGAATGCAAAGCCAAACAATGTGGATAAAGGTGTTAGGGACGCTTTTGCTTGTCTTGAATTAAGCTCTGATTATTTAGCGACCCCAAAAGCTAAGTTGTTGTTGTTAATGTGTGCCATGTTTCCTGAAGATCATGGCATTGTTGTTGAAGATCTCTTGAGGTATGGAGTGGGGTTAGGCTTATGCAAAGATGCGGACTCGTTTGAAACAGCAAGGAGTCAAGTTAGAGCAACTATAAATTATCTCATTGACTCCTCATTCTTGATGCGTTTTTGGAAGTTCAACATGTATACACAAGAATATGTGACAATGCATGATGTGGTTCGTGACTTTGCTTTGTGGAAAGCATCTGAAGAGGATCGCACCATTATGGTGAATTGTACAAAAGAATTAAACAAATTGATTACTGATGAAGCGATAAAAGATTGTTATGCCGTATCTTCATGGTATCACAACAATGAATTATTTCAATTTCCTTCTCATTTAGATGCTCCGAAGCTTGAGTTTCTATTATTACGCTCAATAAAACCCTTGGATATATCACATACATCATTTGAAGGCACCAAAGGACTCAAGGCTTTGATTATTATGTGCAAATATGAGGCTAGGGTTGAACTACAACCTCAATCAATCCAATGGTTGTCTAATCTTCAAACTTTGAGATTGCAGTATTGGGATTTACATGACATCTCTTTTGTGTTAAGTCTTACAAGACTTGAAATTCTTGACCTACAAGGTAGTAAATTTGAAAGAATGCCAAATGGAATTGAAAAATTAAACAAGTTAAAGTTGTTAGATTTGTCGAGTTGCACAATAGATGAATGTTGTTATGAAGCAATAGGAAGGTGTTTGGAGTTAGAAGAGTTGTATGTTTCCAAACATTTTCCCCACTCAAAAAATGCAAATTGCTATCAATACCTTGCGGACCCTGCTGCTTTGATGAAATTGAGGAGGTATAAGTTAGAAATTGGGGAGCATGGCATAGGCTTCGCATCTCAAAATGAAGAAGACGCAAGATCTTTGCACTTGGGTCAATTAAATATCTCAATTTTAGGTGCAAGAATCAAAGACCTTGCACAAAGAGCAACTGTTATTAAATTTTATGAGCTTAAGAGAGGCAGCAAAATATTCATGCCTGATATTGCCCAAGTTGTAGGAGGCACAAATGAGCTAACTAAACTCCATCTTGAAAGGTGTTCAGAGATAGAATGCATTACCAATGAAACTACTCTTCATGAAGATGCAGTTGTCCCCAGATTGGATGAGTTAGTGCTAAGAGACATGGATAATCTTAAACAACTACATCGTGGGCCTTCTCCTTTCAGCTTGTTCCAAAAGTTGAAAAGGCTAAGTATATTCAATTGCCCTCAATTGCTCTACATATACCCTGCTGATTGCAACTTAGGCAATCTCAAGTTTCTCAATATTTCCAGTTGTCCAATGTTGACATCTCTCTTCCCTGTCTCTACCGCATGCACTTTGTTATCCTTAGAGAACCTTCAAATAGAAGGTTGCAGTGAATTGATGCATGTACTAGAGGGAGAGGGTGGTGGTGATGCATGGGAGAATTCAAGAGTCCCAGAATAA	2688	0.3955	MAEVGLSVAAKLAEYLVHPTFQQLQRLFCVRKITRNVDIRKEELILKQGRVQELVQEAINRTERIDDEVNKWKNDVKSLIAEVEKLEEGLKANHGCLRGWCPTWKRYCLCKKLAKTAQRMIDLNTKSDCFSSFSHPVIIPDIDYHSPQNFKLFNSTQKAFDQLCEALRDDGSSIIGLWGMGGSGKTTLVKEVGKKAKELQIFDRVVLTTISQSPNVRKIQGEIADTLGLKLSEESEIGRAKRIALRLQSGERILIILDDVWAMLDLEDIGILTGGNHQRSCKVVLTTRRLEVCNLMECQKMIQLHLLKEDEAWTLFQTHARVDDVAKEVVVHEIAMECKGLPIAIVAMGTCLRGKGVDEMNVALCRLRNAKPNNVDKGVRDAFACLELSSDYLATPKAKLLLLMCAMFPEDHGIVVEDLLRYGVGLGLCKDADSFETARSQVRATINYLIDSSFLMRFWKFNMYTQEYVTMHDVVRDFALWKASEEDRTIMVNCTKELNKLITDEAIKDCYAVSSWYHNNELFQFPSHLDAPKLEFLLLRSIKPLDISHTSFEGTKGLKALIIMCKYEARVELQPQSIQWLSNLQTLRLQYWDLHDISFVLSLTRLEILDLQGSKFERMPNGIEKLNKLKLLDLSSCTIDECCYEAIGRCLELEELYVSKHFPHSKNANCYQYLADPAALMKLRRYKLEIGEHGIGFASQNEEDARSLHLGQLNISILGARIKDLAQRATVIKFYELKRGSKIFMPDIAQVVGGTNELTKLHLERCSEIECITNETTLHEDAVVPRLDELVLRDMDNLKQLHRGPSPFSLFQKLKRLSIFNCPQLLYIYPADCNLGNLKFLNISSCPMLTSLFPVSTACTLLSLENLQIEGCSELMHVLEGEGGGDAWENSRVPE	895

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral27g00032	895	FunFam	Probable disease resistance protein At1g61300	146	301	-	-
	Pral27g00032	895	PANTHER	NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED	35	879	-	-
	Pral27g00032	895	Gene3D	-	142	304	IPR027417	-
	Pral27g00032	895	Gene3D	-	306	386	IPR042197	-
	Pral27g00032	895	Pfam	NB-ARC domain	158	373	IPR002182	GO:0043531
	Pral27g00032	895	SMART	AAA_5	171	326	IPR003593	GO:0016887
	Pral27g00032	895	SUPERFAMILY	L domain-like	471	873	-	-
	Pral27g00032	895	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	143	402	IPR027417	-
	Pral27g00032	895	PRINTS	Disease resistance protein signature	624	640	-	-
	Pral27g00032	895	PRINTS	Disease resistance protein signature	338	352	-	-
	Pral27g00032	895	PRINTS	Disease resistance protein signature	247	261	-	-
	Pral27g00032	895	PRINTS	Disease resistance protein signature	174	189	-	-
	Pral27g00032	895	Coils	Coil	55	89	-	-
	Pral27g00032	895	Gene3D	Ribonuclease Inhibitor	505	880	IPR032675	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral27g00032	Pral-Chr27	715367	718054	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral27g00032	175	634	WRKY Transcription Factor Family	AT5G45050	23.313	6.55e-10	61.2

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral27g00032	-		-	pcin:129317508	1217.6