Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral27g00029 ATGGATGAGGTGGGAATATCAATAGCAGCAAAACTTGCTGAATATTTGGTGGATCCTACTTTACGCCAATTGCAATATTTGTTTTGCGTCGGAAAAATCACCAGAAATGTTGAGACCAAAAAGGAGGAATTGGTACTGAGGCAGGGGAGGGTGCAGGAACGTGTTGAAGAAGCCATTAAGAGGACTGAGAGGATCGATGATGAGGTTAACAAGTGGAAGAATGAGGTGGTGAGGCTCATAGCAGATGTGGAGAACTTGGTGCAAGAACTTAATGCCAACAATGGCTGCTTCCAAAGGTGGTGTCCTACTGGGAGGAGATATCATCTCTGCAAAGTGTTGGCAAAGGCAACCCAGCGGATGGCAGAGCTAAATACAAAGAGTGATCAGTTCGAACCATTTTCGCATCATGTTATTGTTCCAGATATAGAGTATCACTCTTCTAAAGATTTTATGTTCTTCAAGTCAACAGAAATGGCATATGATCAACTATGGGAGGCACTGCAAGATGATGATAGCTCTATAATTGGGTTGTGGGGTATGGGCGGTTCGGGCAAAACCACATTGATAAAGGAAGTAGGAAAGAAAGCCAAAGAATTAGGGCTATTTGATCGAGTTATAATCACAACAGTTTCCCAAACTCCAAATATTAGGAAGATTCAGGGTGAACTTGCAGACCTGATGGGACTTGAGTTGAAGGAAGAAACTGAAGTGGGAAGGGCGAGAAGAATTGCAATGAAATTACAAAGTCCAGAGGAGCGAATTCTGATTATATTGGATGATGTATGGGCTATGTTGAACCTTGAGGATATAGGGAAACCCTTTGGGGATGAAGGTCCCAGAAATTGCAAAGTCCTTCTTACCACACGTCGTCAAGATGTATGTAGTTTGATGGATTGCCAAAAAACTATTCCATTGGGTTTGCTAACAGAACATGAAGCCTGGGATCTATTTCAAACTCATGCTAAAGTAGATGATGGTGCTAGAAAAGTGGCCCAGGAAGTTGTTACGGAATGTAAGGGACTACCCATTGCAATTGTGGCCATGGGGAAGTGCTTAAGAAGAAAAGGACTTGATGAGGTGAATGTAGTATTGCATAGGTTAAGACATTCGAAGCCAGTTGACGTGGATAAGGGAGGGAGTGATGCTTTTACTTGTCTGAAGTTAAGCTATGATTATTTGGGAACTGTAGAAGCCAAATCGTTGTTCTTGATCTGTGCTATGTTTCCCGAAGATCATGAAATTATCATTGAAGATCTTTTTAGATATGGAGTTGGGTTGGGCCTATGCGAAGATGCTGACTCATTTGAAATAGCAAGGAGCCAAGTTATAGCAGCCATAAATGTTCTCATTGATTCTTCGTTGTTGATGTATTTTGTCAACTTCAAGAGTGAAAAATCTGTGAAAATGCATGACATGGTTCGCGATGTAGCTTTGTGGATAGCACCTAGAGAGCATGGTACAATTATGGTAAACTCTGCTAAAGAATTGAATGAATTGCTTGAAGATGAAGCAGTAAAAGATTGCTATGCAGTATCTTCATGGAAGAAAAAAACTGAATTGGTTAAATTTCCTTCCCAATTGGACGCTCCAAAGCTTGAGCTTCTGTTGTTAAATTCGACCAAACCCTTGGATTTATCACATGCATCATTTGAAGGTGTAAAAGGACTAAAAGTTGCAGCTTTGATTGGCAATCAGTTTGGCTATTTGACTGAATTAGTACCTCATTCAGTGCAACAGTGGTCTAATCTTCGAACATTGCGCTTGGAAAGTTGGGATTTAGGTGACATTTCTTTTTTGGTAAACCTAAAAAGGCTGGAAATTCTTGACTTGAAAGGCAGCAAATTTAAAAAATTGCCAAATGGAATTGAAAAACTAAATCGTCTGAAATTGCTCGATTTGTCATGGTGTGCAGCAGAAGAGTGTTTTTGTAAAGTAATTGGAAGGTGTTCGCAACTAGAAGAATTATATATTTCTAGAAATTTACGGCCTTCAGGATACACAATTTGTTATGAATGCTTCGTGGGGGCCCCAGCTCTCCCAAAGTTGAGAAGGTATACATTAGAAATGGGGCAATGCGCCAAGCCTATGTTCTGGAAAAAAGGCTTCAGAGAGTTATCCTTTGGGGAATTAAATATCTCCATTTCAAGTGCAATGATCAAGGATCTTGCACAAAGAGCAACTGCAATTGAATTTTATAACCTTCAAGGAGGCTGCAAAAGTTTCAGTCCAGATGTGGTTCAAGCTGTAGGAGGCACGAATGAGCTAATTAAACTCTGTCTTCAACACTGTTCTGAGTTTGACTGCCTTACTGATGAGACTAGTCCTCATGATGAAGACATAGTTGTCCTTAGATTGGTTGAATTGGTGTTGAAGTATATGGATAATCTAAAACAACTATGTCAGGGTCCTCCTAATCGTAGCTTATTCCTAAATCTGGAAAGTCTATATATAGGAAGTTGCCGTCAATTGATTAACATGTTTCCTGCTAATTGCAACTTATGCAACCTTAAGGTCCTTAACATTGTCAACTGTCCGATGTTGACATCTGTCTTCTCCATCTCTGTTGCTTGCACTCTGTTATCTCTAGAAAAACTCACAATAGAAGGATGTCATGAATTGAAGCACATAATTGAGGGAGAGGATGGCGTTGATATATGGGAGGATCCGAGATTCCCAAAATGGGAAGTTCTATCTGTTTGTGATTGTAAGCAATTAGAATCTATTTGCCCAAGCTTCTGCGTCCAAGGGTTTGTGCAATTGAAATCTTTATTCATAAGAGATACTCCTCAGTTGAAATTTTTATTTGGTGAACATAGTGAAGAAACATCCATACGTGATGAAAATGAGACTAAGATAGTGCTTCCACTTTTAGAAGAACTCAGATTGGAGTACCTCCCAAATCTACTCAGAATTTGCTCAGAAAGCCATCATCTATTGTGGCCATCTATAAAGAAAGTAAAATGGACAGGCTGTCCAAGATTGAATGCTTCATGTGATCCTCTCATTATTGATTCAGAACTAAGGCAATCAGGTCCAAATATGGAGTCTCATGCATATAATGACCAGCAACCGAGAGTTGGAGAATCCAGGCCCGTAGCAGCTATTTCAAATGTTGAAAGCATTGTCTTTTTCAATTGTGGGGTAGTATCTACATTTATCCCAAAAGTTCCAATATTCCAATGCCTTAAACAATTGTCTGTGGAAGGATGTGGAAATCTGAAATTTGTTTTCTCAGCTAGTATCTGTCAAAGCCTTCCAGAGTTAACTTCTATAACCATATCTTGCTGTCACGAGATGAAGGAAGTCTTTTTGGGAAATGAAGAAACTCAGGAGAGTCTATCCATATATCGACTTTGTCTGCCAAATTTACAGAGTCTGGAAATCAAACAGTGCAACAAGTTGAAAAGGATTTTTTCCTTTATGGTTACTGATGATGCTATCTTAATGTTTCCAAAACTAAGAATTCTAAGCATATCAAAAGCTTCACAATTGGAAGAAATGTTCAGATGCTCAAATATTGAAGACCATGTTATTGACAGTGAAAATGAAATCATGTTCCCAAACTTGGGATTGATAACACTTGAGGAGTTGCCGAGACTTGCTAATTTCTGCCAAGGGTTCAAGTTTCAAATATCTATGTATTGCAGTGTGTTGGTATATGAATGCCCAAAACTGGTGCCAAATGTGGGGTCGAGTGCCAGGTGGGGTGTAGTGAGATTTGTTAGGAAGCATGTGTTGAAATGCTGCCAATTAGACAATAATGAGGGTCTCTCTCCGCCACTTCTTATTCTAAATTCAGAAGAACTGGATGATTTAAGTGTTGAAGTGCAAGACTTCTGTAGAGTCATCGGTGACGAGGACTCAGAGATGGCCGGTTTATATCAAACACTTAAGGGTCTTACTCCCACTCAAGGTTTGAGTTTCCAATTTCTTCATTCTTTGGAAGTCGTTCGATGTGGAAAGTTGAAGTTTTTATTCACTGCAAGCACCATTGTCCATAACAGCCTTCCCAAATTGAAATTCCTAACCTTATCTCATTGTGAAGAATTGGAGGAAATAATTGCAGACAATGAGGAGCCTCGAAACACATCTAATACTCAAGTTTGCTTCCCAGAACTACGAGAGTTGGAGGTTCAAAGGTGTAACAAGCTCAAAAGACTCTTTCCTACAACCATAAACACCATTCTTCCACAGCTTGATTCTTTGTTGATAACTGAGGCTAATCAATTAGAAGTGATATTTGGACATGAAAGGGAAGATGATGCTAACGATGGAGAGAAAATTGTGCTTCCAAGCTTGAGAAACATAAAGCTCAGAAATTTGCCCAATTTCGTCCGTGTTTGTCAAGGATTTCAGTTTGAAGCAGTGCAGCTCTCCAGCATCAACATATGCAAATGCCCCATGTTTCTTGATCCAATTTTTGGATCAACTCAAATGGTTTCACTTCAACAATGGAAATCAATGGATTCTAGAGGAGTTGAAGATTTCCAAACTGAGGCAAGTGTAGAAAAAGAGTTTCATGCCAGTGAAGAAAAGGGGAAGATCATGATCTCAGAAGTACATTCTTTGACTTTGAGGCATTCAGCTAACCTCATAACTTCTTTGTGGGAGGGTCCCACTTTAATCAGCTTCCAAAATCTTGGACAGTTAAATGTGTTCGGATGCAGAAGATTAAAGTCTATCTTCCCTTGCACTGTGATCAAAAGCCTTCCATGTTTAGGCTCTCTGACCATTATTGAATGTGAAGAGTTGGAGGAAATCATATCAGCAAAATGGGAACAAGAGTATGATCACTTTCCAAATTCTTCCTTGTGCTTCCCAAGACTTGACAGTCTTGAAGTCTCTAGATGCAGAAAGTTGAAATGTCTCTTCTCTCTGCCCTCTAATGGTGATTTTGCAAAGTTGGAAGATCTGAAAATAAAAGGGTGCTCTCAACTGGAGCAAGTTTTTAGTTGTGAACTTGAAATCCATGAGGAAGAGTCCAACAAGAACCTGCTTCCAAATCTCAGATATCTTCTACTTAAAGACTTGCCCAAACTCACTCACATTTGTGCGAGTTTTCCTTCTCTGTTAAAGTTTTTGCCTCTGAGGATCTTGGAAGTTGAGGATTGCCCTGTGCTCCAAAACAGAGATAATGTTGAAGAAAGTGGATGCTATGATTCAGATGGTTTTTATGACGACGACTTTATAGCATTTGAGACTACAAATCAATTTCTTCAAGGGAGGCCTCCCCAACCGCCCGCTTCGATGGTTCTTGATACAATCGGTTGTGTCGACGGATGTTTTGAGAAGAAGGAAAGTTCTAGAAGCTACCACAACCTTAACGGGGCTCGTCCTCTAACATTGGTGGCAGCGTCGTCGTCGTCCTCACCTTACTCAGATGTTCAGTCCTTGGCCATAGCTCTTGCTCTTTGCTTTTCCTCTTAA 5427 0.3995 MDEVGISIAAKLAEYLVDPTLRQLQYLFCVGKITRNVETKKEELVLRQGRVQERVEEAIKRTERIDDEVNKWKNEVVRLIADVENLVQELNANNGCFQRWCPTGRRYHLCKVLAKATQRMAELNTKSDQFEPFSHHVIVPDIEYHSSKDFMFFKSTEMAYDQLWEALQDDDSSIIGLWGMGGSGKTTLIKEVGKKAKELGLFDRVIITTVSQTPNIRKIQGELADLMGLELKEETEVGRARRIAMKLQSPEERILIILDDVWAMLNLEDIGKPFGDEGPRNCKVLLTTRRQDVCSLMDCQKTIPLGLLTEHEAWDLFQTHAKVDDGARKVAQEVVTECKGLPIAIVAMGKCLRRKGLDEVNVVLHRLRHSKPVDVDKGGSDAFTCLKLSYDYLGTVEAKSLFLICAMFPEDHEIIIEDLFRYGVGLGLCEDADSFEIARSQVIAAINVLIDSSLLMYFVNFKSEKSVKMHDMVRDVALWIAPREHGTIMVNSAKELNELLEDEAVKDCYAVSSWKKKTELVKFPSQLDAPKLELLLLNSTKPLDLSHASFEGVKGLKVAALIGNQFGYLTELVPHSVQQWSNLRTLRLESWDLGDISFLVNLKRLEILDLKGSKFKKLPNGIEKLNRLKLLDLSWCAAEECFCKVIGRCSQLEELYISRNLRPSGYTICYECFVGAPALPKLRRYTLEMGQCAKPMFWKKGFRELSFGELNISISSAMIKDLAQRATAIEFYNLQGGCKSFSPDVVQAVGGTNELIKLCLQHCSEFDCLTDETSPHDEDIVVLRLVELVLKYMDNLKQLCQGPPNRSLFLNLESLYIGSCRQLINMFPANCNLCNLKVLNIVNCPMLTSVFSISVACTLLSLEKLTIEGCHELKHIIEGEDGVDIWEDPRFPKWEVLSVCDCKQLESICPSFCVQGFVQLKSLFIRDTPQLKFLFGEHSEETSIRDENETKIVLPLLEELRLEYLPNLLRICSESHHLLWPSIKKVKWTGCPRLNASCDPLIIDSELRQSGPNMESHAYNDQQPRVGESRPVAAISNVESIVFFNCGVVSTFIPKVPIFQCLKQLSVEGCGNLKFVFSASICQSLPELTSITISCCHEMKEVFLGNEETQESLSIYRLCLPNLQSLEIKQCNKLKRIFSFMVTDDAILMFPKLRILSISKASQLEEMFRCSNIEDHVIDSENEIMFPNLGLITLEELPRLANFCQGFKFQISMYCSVLVYECPKLVPNVGSSARWGVVRFVRKHVLKCCQLDNNEGLSPPLLILNSEELDDLSVEVQDFCRVIGDEDSEMAGLYQTLKGLTPTQGLSFQFLHSLEVVRCGKLKFLFTASTIVHNSLPKLKFLTLSHCEELEEIIADNEEPRNTSNTQVCFPELRELEVQRCNKLKRLFPTTINTILPQLDSLLITEANQLEVIFGHEREDDANDGEKIVLPSLRNIKLRNLPNFVRVCQGFQFEAVQLSSINICKCPMFLDPIFGSTQMVSLQQWKSMDSRGVEDFQTEASVEKEFHASEEKGKIMISEVHSLTLRHSANLITSLWEGPTLISFQNLGQLNVFGCRRLKSIFPCTVIKSLPCLGSLTIIECEELEEIISAKWEQEYDHFPNSSLCFPRLDSLEVSRCRKLKCLFSLPSNGDFAKLEDLKIKGCSQLEQVFSCELEIHEEESNKNLLPNLRYLLLKDLPKLTHICASFPSLLKFLPLRILEVEDCPVLQNRDNVEESGCYDSDGFYDDDFIAFETTNQFLQGRPPQPPASMVLDTIGCVDGCFEKKESSRSYHNLNGARPLTLVAASSSSSPYSDVQSLAIALALCFSS 1808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral27g00029 1808 SUPERFAMILY RNI-like 1056 1468 - -
Pral27g00029 1808 PRINTS Disease resistance protein signature 623 639 - -
Pral27g00029 1808 PRINTS Disease resistance protein signature 174 189 - -
Pral27g00029 1808 PRINTS Disease resistance protein signature 338 352 - -
Pral27g00029 1808 PRINTS Disease resistance protein signature 248 262 - -
Pral27g00029 1808 FunFam Probable disease resistance protein At1g61300 145 302 - -
Pral27g00029 1808 SUPERFAMILY RNI-like 1523 1706 - -
Pral27g00029 1808 Gene3D Ribonuclease Inhibitor 505 995 IPR032675 -
Pral27g00029 1808 Pfam NB-ARC domain 159 390 IPR002182 GO:0043531
Pral27g00029 1808 Gene3D - 307 389 IPR042197 -
Pral27g00029 1808 Gene3D - 146 303 IPR027417 -
Pral27g00029 1808 Gene3D - 390 478 IPR036388 -
Pral27g00029 1808 SUPERFAMILY L domain-like 468 978 - -
Pral27g00029 1808 Gene3D Ribonuclease Inhibitor 1024 1208 IPR032675 -
Pral27g00029 1808 Gene3D Ribonuclease Inhibitor 1293 1417 IPR032675 -
Pral27g00029 1808 Coils Coil 55 93 - -
Pral27g00029 1808 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 919 1168 - -
Pral27g00029 1808 Gene3D Ribonuclease Inhibitor 1430 1663 IPR032675 -
Pral27g00029 1808 SMART AAA_5 171 327 IPR003593 GO:0016887
Pral27g00029 1808 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 145 405 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral27g00029 Pral-Chr27 651314 659141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral27g00029 171 633 WRKY Transcription Factor Family AT5G45050 24.740 1.80e-16 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral27g00029 - - pcin:129317821 1515.36