Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral27g00028 ATGGCAGAGGTGGGAGCGTCGGTGGCAGCAAAACTTGCTGAATATTTGGTGCAACCAACTTTACAGCAGCTAAAATATTTGTTCTGTGCCGGCAAAATCACCAAAAATGTTGAGATCAGAAAGGAGGAGATGATGCTCAAGCAAGGAAAGGTGCAGGAACATGTTCAAGAGGCCATCAACAGGACTGAGAGGATTGATGGTGAGGTTGACAAGTGGAAGAATGACGTGAAGAGCCTCATAGCAGAGGTGGAGAAATTGGAGGGAGAACTAAGGGCCAATAACCATGGCTGCCTTCGAGGGTGGTGTCCTACTTGGAGCAAATATTGTCTTTGCAAAAAGTTGGCTAAGACAATCCAGAGAATGATTGATCTAATTACAAAGACTAATCATTTCAACCCATTTTCTCACCCCGTTATTGTTCCTGATATAGTGTATCACTCTTCTCAAAACTTTAAGCTATTCAATTCAACACAAATGGCTTTTGATCAGCTGTGGGAGGCTTTGCAAAATGATGGTAGCTCCGTAATTGGCCTTTGGGGCATGGGAGGGTCAGGGAAAACCACCTTGGTGACAGAAGTGGGAAAGAAAGCCAAAGAGTCACAACTCTTTGATAGAGTTGTGATTGCCACAATTTCTCAAAGTTTAGATATCATGCAGATTCAAGATGAAATTGCTGACTCGTTGGGGCTCAAATTGGAAGAAAAATCTAAAACAGGAAGGGCAAAAAGAATTGCATTACGATTAGAAAGTGGAGAACGAATTTTGATAATCCTAGATGATGTGTGGGCTAAGCTAAATCTTGAGGACATAGGGATTCCCTTTATGGGAAATCATCCAAGAAGTTGGAAAGTTGTCTTGACCACACGCCGTTTAGAAGTATGTACCTTGATGGAATGTCAAAAGATGATCAAACTTGATTTGTTAAAAGAAGATGAAGCTTGGATTTTGTTTCAAAGTCATGCTAATGTTAATGATGCTTCTAAAGAAGTTATGGCACGAGCAATTGCCATGGAATGTAGAGGCCTACCCATTGCACTTGTGGCTATGGGAACTTGCTTGAAAGGAAAAGGAGTTGATGAGATGAATGTTATGTTATATAGGCTGAGGAATGCGAAGCCAAACAATGTGGATAAAGGTGTGAGGGATGCTTTTGCTTGTCTTGAATTAAGCTATGGTTATTTGGCGACCCCAGAAGCCAAGTTGTTGTTGTTAATGTGTGCTATGTTTCCTGAAGATCATAACATTGTTGTTGAAGATCTTTTCAGATATGGAGTGGGATTAGGCCTATGTAGAGATGTAGACTCTTTTGAAATAGCAAGGAGCGAAGTTACAACAATTATAAATTATCTCATTGACTCCTCATTGTTGATGCACTATTCACCAAAGTTCAACACATATGCAGAAAAATATGTGAAATTGCATGATACGGTTCGTGATTTTGCTTTGTGGAAAGCATCTAAAGAGAATCGTACCATTACGGTAAGTTGTACAAAAGAAATGAATGAATTGATTGCTGATGAAGCGGTAAAAAATAGCTATGCCATATCTTCTTGGCATGACACCAACAAATTACTTGAATTTTCTTCTCAATTAGATACCCCAAGACTTGAGTTTCTATTGTTATGTTCAAGAGAGCCCTTGGATATATCACATGTGTCATTTGAAGGCACTAAGGGACTCAAGACATTGATTATTATGTGCATGGCTTATTGGAGTGGGATTGAACTGCAACCTCAATCAATCCAACACTTGTTTAATCTACGAACTTTGCGATTACAAGGTTGGGATTTACATGACATCTCTTTTGTGGTAAGCCTTAAAAGACTTGAAATTCTTGACTTGAGAGGTAGTAAATTCAAAAGAATGCCAAATGGAATTGAAAAATTAAACAAGTTGAAGTTGTTAGATTTGTCAAATTGTAAAACAGATGAATGTTGTTATAAAGTAATAGGAAGGTGTTCACAATTAGAAGAGTTGTATGTTTCCACACATTCTCCACATTCAGAAAACGAAAATTGCTATGAGTACCTTATGGCCCCCCCTGGTTTGATGAAATTGACAAGGTATAAGTTAGCAATTGGGGAGCATAGCTTAGGCTTGGTATTTCAGAATGAAGACACGAGATCATTATGGTTGGGTCAGTTAAATATGTCTATATTAGGTGCAACAATCAAGGATCTTGCACAAAGAGCATCTTCAATAAAATTTTATGAGCTTGAGGGAGGCAGCAAAACTCTCATGCCTAATATTGTCCAAGCTGTAGGAGGCATGTATGGGTTAACTAAACTCAGTCTTGAGAGGTGTTCAGAGATCGAATGTATTACCAGCGAAACTACTTTTCATGAAGATGTGGTTGTCCCCAAATTGGATGAGTTAGTGCTAACACTCATGGATAATCTTAAAGAACTATATCATGGTCCTTCTCCTTGTAGCTTTTTCCAAAAGCTGGAAAGACTTACTCTATCCAATTGCCCTCAATTGCTCCACATATTCCCTGCTAAGTGCAACTTATGCAACCTTAAGTTTCTCAAAATTCTCAATTGTCCGATGTTGACATATCTCTTCCCTATCTCTGCTGCTTGCACTTTGTCATCCTTAGAAGAGCTCCAAATAGAAGGCTGTAGTGAATTGAAGCATGTAATAAAGGGAGAGGGTGATGGTGATGTATGGAAGAGTTCAAGATTCCCAAAATTAAAAATAATGTCTATTGATGATTGTTGCAAATTAGAATATGTATGCCCTGTCTTTTTAGCTCAAAGATTTGTACAATTGCAGCATCTATCCATAGCAAATGCTCCCCAGATGAAATTTGTGTTTGGAGAAAACGGTGGTGAAGAACAACCAATGCATCATCAATATGAAACCCAGATAGTGCTTCCTCTCTTGGAACATCTCAAGCTTGAAAGTCTTTCAAATCTTGCTAGAATTTGCTTAGGGAGCTGTCATCCAAGATGGACATCTATAAAGACAATAGAATGGAGGGATTGTCCAAATATGGATTTTCAGGAACTTGAGGGCCATCAACTGAGGAATGAAGAATACATGTTATTGCCAACTATAGAAATTCCAACATTTCAATACCTCAAAGAATTAACTTTGGGAGAATGTGCAAGACTGAAATTTGTCTTTTCTACTCATATCTATCAAAGTCTTCCAGAGTTAACCTCAGTGACCATATCTTGTTGTGAGGAGTTGGAGGCAATTTTTTCAGGGAATGGAGAGACTCAAAAGAATCTATCCATCACTGAATCTTGTCTGCTGAAATTGAACAAATTGAAAATCTTTGTGCTTCTGGTACCTTAA 3303 0.3851 MAEVGASVAAKLAEYLVQPTLQQLKYLFCAGKITKNVEIRKEEMMLKQGKVQEHVQEAINRTERIDGEVDKWKNDVKSLIAEVEKLEGELRANNHGCLRGWCPTWSKYCLCKKLAKTIQRMIDLITKTNHFNPFSHPVIVPDIVYHSSQNFKLFNSTQMAFDQLWEALQNDGSSVIGLWGMGGSGKTTLVTEVGKKAKESQLFDRVVIATISQSLDIMQIQDEIADSLGLKLEEKSKTGRAKRIALRLESGERILIILDDVWAKLNLEDIGIPFMGNHPRSWKVVLTTRRLEVCTLMECQKMIKLDLLKEDEAWILFQSHANVNDASKEVMARAIAMECRGLPIALVAMGTCLKGKGVDEMNVMLYRLRNAKPNNVDKGVRDAFACLELSYGYLATPEAKLLLLMCAMFPEDHNIVVEDLFRYGVGLGLCRDVDSFEIARSEVTTIINYLIDSSLLMHYSPKFNTYAEKYVKLHDTVRDFALWKASKENRTITVSCTKEMNELIADEAVKNSYAISSWHDTNKLLEFSSQLDTPRLEFLLLCSREPLDISHVSFEGTKGLKTLIIMCMAYWSGIELQPQSIQHLFNLRTLRLQGWDLHDISFVVSLKRLEILDLRGSKFKRMPNGIEKLNKLKLLDLSNCKTDECCYKVIGRCSQLEELYVSTHSPHSENENCYEYLMAPPGLMKLTRYKLAIGEHSLGLVFQNEDTRSLWLGQLNMSILGATIKDLAQRASSIKFYELEGGSKTLMPNIVQAVGGMYGLTKLSLERCSEIECITSETTFHEDVVVPKLDELVLTLMDNLKELYHGPSPCSFFQKLERLTLSNCPQLLHIFPAKCNLCNLKFLKILNCPMLTYLFPISAACTLSSLEELQIEGCSELKHVIKGEGDGDVWKSSRFPKLKIMSIDDCCKLEYVCPVFLAQRFVQLQHLSIANAPQMKFVFGENGGEEQPMHHQYETQIVLPLLEHLKLESLSNLARICLGSCHPRWTSIKTIEWRDCPNMDFQELEGHQLRNEEYMLLPTIEIPTFQYLKELTLGECARLKFVFSTHIYQSLPELTSVTISCCEELEAIFSGNGETQKNLSITESCLLKLNKLKIFVLLVP 1100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral27g00028 1100 Coils Coil 69 89 - -
Pral27g00028 1100 Pfam NB-ARC domain 160 390 IPR002182 GO:0043531
Pral27g00028 1100 PRINTS Disease resistance protein signature 339 353 - -
Pral27g00028 1100 PRINTS Disease resistance protein signature 627 643 - -
Pral27g00028 1100 PRINTS Disease resistance protein signature 175 190 - -
Pral27g00028 1100 PRINTS Disease resistance protein signature 248 262 - -
Pral27g00028 1100 Gene3D - 389 484 IPR036388 -
Pral27g00028 1100 FunFam Probable disease resistance protein At1g61300 146 302 - -
Pral27g00028 1100 Gene3D Ribonuclease Inhibitor 695 1096 IPR032675 -
Pral27g00028 1100 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 405 IPR027417 -
Pral27g00028 1100 Gene3D Ribonuclease Inhibitor 485 688 IPR032675 -
Pral27g00028 1100 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 923 1093 - -
Pral27g00028 1100 Gene3D - 146 306 IPR027417 -
Pral27g00028 1100 SUPERFAMILY L domain-like 473 1073 - -
Pral27g00028 1100 Gene3D - 307 388 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral27g00028 Pral-Chr27 637904 645751 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral27g00028 176 640 WRKY Transcription Factor Family AT5G45050 22.770 2.57e-09 59.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral27g00028 - - pcin:129317821 1187.17