Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral27g00025 ATGATTGATCTAAACACAAAGAGTGATCGCTTCAATCCATTTTCTCATCCTGTTAGTATTCCAGGTATAGAGTATCACTCTTCTAAAGGTTTTATGTTCTTTGAGTCAATGAAAAAAGCACATGATGAACTATGGGCAGCATTGCGAGATGATGATAGCTCTATGATCGGGTTGTGGGGGATGGGCGGTTCAGGCAAAACCACATTGGTAAAGGAAGTAGGAAAGAAAGTCAAAGAATCAAAGCTATGTGATGAGGTTATAATTGCAACAGTTTCCCAAACTCCAAATATTATGAAGATTCAAGGTGAAATTGCGGACTTATTAGGACTCAAATTGGAGGAAGAAACTGAAGTGGGAAGGGCAAGAGGAATTGCATTGAAATTACAAAGTTCAAACAAACGAATTTTGATTATATTAGATGATGTATGGGATACGCTGAACCTTGAGGATATAGGAAATCCCCATAGGGATGAAGGCCCAAGAAACTGTAAAATTCTTCTCACCACACGTCGTCAAGACGTGTGTACTATGATGGATTGCCAGAAAACAATTTCCTTGGGTTTGTTAACAGATGGGGAAGCTTGGGATCTATTTCAAACTCATGGTAGAGTAGATGATGGTGTTAGAAAAGTGGCCCAAGAAGTTGTCGCTGAATGTAAGGGACTACCCATTGCAATTGTGGCCATGGGGAAGTGCTTAAGAAGAAAAGGACCCGATGAGATGAATGTGGTATTGCACAGGTTGAGACATTCAAAGCCACTTGATGAGGATAAAGCTTTTACTTGTCTTAAGCTAAGCTATGATTATTTGAGAACTACAGAGGCCAAGTTGCTGTTCTTAGTATGTGCTATGTTTCCTGAAGATCATGAAATCGAAATTGAAGATCTTTTTAGGTATGGAGTTGGATTGGGCCTATGCAAAGATGCTGACTCATTTGAAATAGCAAGGAGCCAAGTTCGATCAGCTATAAATGTTCTCGTTGACTCTTCATTGTTGATGTTTTCTGTCAACTTCAGAAAAGGAAAATGTGTGAAAATGCATGATATGGTTCGTGATGTAGCTTTATGGGTAGCAAAGCAAGAGAATAGTACCATTATGGTAAACAATGCAAAAGCATGGAATGAATTGATTTCTGATGAAGTTATAAAAGATTGCTATGCTATATCCTCATGGTATGATGATGGTATATTATTTCAATTTTTGCCTCAACTGGGTGCTCCAAAACTTGAGTTTCTATTGTTACATTCAGTGGAACTTGTTGATATATTACATGCATCATTTAAAGGCTCTACAGGACTCAAGGCATTGATTATTATGTGCAAGAATTGGCATATGATTGAGCTACAACCTCAATCAATTCAACACTTGTCCAATCTTCGAACTTTGCAATTGCAAGGTTGGTATTTTGGTGACATCTCTTTCGTGGTAAGTCTTAGAAAACTTGAAATTCTTGATTTGCGAAGTAGTTGTTTTGAAAGAATGCCAGATGGAATTGAAAAATTAAACAAGCTGAAGTTGTTAGATTTGTCAAGTTGTAGGATAGATGAATGTTGTTATAAAGCAATAAGAAGTTGCTCACAATTAGAAGAGTTGTATGTCTCCAAAACATTCTCCACACGCAAAACATGCAAATTGCTATGA 1641 0.3742 MIDLNTKSDRFNPFSHPVSIPGIEYHSSKGFMFFESMKKAHDELWAALRDDDSSMIGLWGMGGSGKTTLVKEVGKKVKESKLCDEVIIATVSQTPNIMKIQGEIADLLGLKLEEETEVGRARGIALKLQSSNKRILIILDDVWDTLNLEDIGNPHRDEGPRNCKILLTTRRQDVCTMMDCQKTISLGLLTDGEAWDLFQTHGRVDDGVRKVAQEVVAECKGLPIAIVAMGKCLRRKGPDEMNVVLHRLRHSKPLDEDKAFTCLKLSYDYLRTTEAKLLFLVCAMFPEDHEIEIEDLFRYGVGLGLCKDADSFEIARSQVRSAINVLVDSSLLMFSVNFRKGKCVKMHDMVRDVALWVAKQENSTIMVNNAKAWNELISDEVIKDCYAISSWYDDGILFQFLPQLGAPKLEFLLLHSVELVDILHASFKGSTGLKALIIMCKNWHMIELQPQSIQHLSNLRTLQLQGWYFGDISFVVSLRKLEILDLRSSCFERMPDGIEKLNKLKLLDLSSCRIDECCYKAIRSCSQLEELYVSKTFSTRKTCKLL 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral27g00025 546 Gene3D - 267 355 IPR036388 -
Pral27g00025 546 SUPERFAMILY L domain-like 384 536 - -
Pral27g00025 546 FunFam Probable disease resistance protein At1g61300 32 183 - -
Pral27g00025 546 Pfam NB-ARC domain 39 268 IPR002182 GO:0043531
Pral27g00025 546 PRINTS Disease resistance protein signature 55 70 - -
Pral27g00025 546 PRINTS Disease resistance protein signature 129 143 - -
Pral27g00025 546 PRINTS Disease resistance protein signature 499 515 - -
Pral27g00025 546 PRINTS Disease resistance protein signature 219 233 - -
Pral27g00025 546 Gene3D - 29 186 IPR027417 -
Pral27g00025 546 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 15 538 - -
Pral27g00025 546 Gene3D - 188 266 IPR042197 -
Pral27g00025 546 Gene3D Ribonuclease Inhibitor 389 544 IPR032675 -
Pral27g00025 546 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 29 282 IPR027417 -
Pral27g00025 546 FunFam Probable disease resistance protein At1g63360 267 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral27g00025 Pral-Chr27 618109 619749 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral27g00025 56 361 WRKY Transcription Factor Family AT5G45050 27.273 2.68e-14 74.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral27g00025 - - pcin:129301500 670.233