Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral27g00020 ATGGCAGAGGTGGGAGTGTCGTTAGCGGCGAAACTTGCTGAATATCTAGTGGATCCAACTTTACGGCGGTTGCAGTATTTGTTCTGTGTCGGCAAAATCACCAAAAACGTTCAGATCAGAAAGGAGGAGCTGATACTCAAGCAAGGAAGGGTACAGGAACGTGTTCAAGAGGCCATCAACAGGACTGAGAGGATTGATGGTGAGGTTGACAGGTGGAAGAATGATGTAAAGAGTCTCATAGCAGAGGTGGAGGAATTGGAGGACGAACTAGGGGCCAACAATGGCTGTCATCGACGATGGTATCCTACTTGGAGGAGATATTGTCTCTGCAAAAAGTTGGCTAAGACAACCCAGAGGATGATTGATCTAAACACAAAGAGTGATCGCTTCAATCCATTTTCTCATCCTGTTATTATTCAAGGCATAGAATATCACTCTTCTAAAGGTTTTATGTTCTTTGAGTCAACGAAAAAAGCACATGATGAACTATGGGCAGCATTGCAAGATGATGATAGCTCTATGATCGGGTTGTGGGGTATGGGCGGTTCAGGCAAAACCACATTGGTAAAGGAAATAGGAAAGAAAGCCAAAGAATCAAAGCTATGTGATGAAGTTATAATTGCAACAGTAACCCAAACTCTAAATATCAGGAAGATTCAAGGTCAAATTGCGGACTTATTGGGACTTGAGCTGAAGCAAGAAACTGAAGAGGGAAGGGCAAGAAGAATTGCATTGAAATTACAAAGTTCAAACAAACGAATTTTGATTATATTAGATGATGTATGGGATACGCTGAACCTTGAGGATATAGGGAATCCCTATAGGGATGAAGGTCCAAGAAACTGTAAAATTCTTCTCACCACACGTCGTCAAGAAGTGTGTACTATGATGGATTGCCAGAAAACAATTTCCCTGGGTTTGTTAACAGAAGGTGAAGCTTGGGATCTATTTCAAACTCATGGTAGAGTAGATGATGGTGTTAGAAAAGTGGCTCAAGAAGTTGTCGCTGAATGTAAGGGACTACCCATTGCAATTGTGGCCATGGGAAAGTGCTTAAGAAGAAAAGGACTTGATGAGATGAATGTAGTATTGCACAGGTTGAGACATTCAAAGCCACTTGATGAGGATAAAGCTTTTACTTGTCTCAAGTTAAGCTACGATTACTTGAGAAATGCAGAGGCTAAGTTGTTGTTCTTGGTATGCGCCATGTTTCCTGAAGATCATGAAATCGAAATTGAAGATCTTTTTAGATATGGAGTTGGATTAGGCCTATGCAAAGATGCTGACTCATTTGAAATAGCAAGGAGCCAAGTTAGAGCAGCTATAAATGTTCTCGTTGACTCTTCATTGTTGATGTTTTCTGTCAGCTCCAGAAAAGAAAAATGTGTGAAAATGCATGATATAGTTCGTGATGTAGCTTTATGGGTAGCAACTCAAGAGAATAGTACCATTATGGTAAACAATGGAAAAGAATGGAATAAATTGATTTCTGATGAAGTTATAAAAGATTGCTATGCTATATCTTCATGGTATGATGATGGTATATTATTTCAATTTTTGTCTCAACTGGGTGCTCCAAAACTTGAGTTTCTATTATTAGATTCTGTGAAACTTGTTGATGCATTACATGCATCATTTGAAGGCTCTACAGGACTCAAGGCATTGATTATGATGTGCAAGTATTTCCATAGGATTGAGCTACAACCTCAATCAATTCAACACTTGTCTAATCTTCAGACTTTGCGATTGCAAGGTTGGAATTTACGTGACATCTCTTTTGTGGTAAGCCTTACAAGACTTGAAATTCTTGACTTGCGAAGAAGTATGTTTAAAAGAATGCCGAATGGAATTGAAAATTTAAACAAGCTGAAGTTGTTAGATTTGTCATATTGTAACATAGGTGAATGTTGTTACCAAGTAATAGGAAGGTGCTCACAGTTAGAAGAGTTGTATGTTTCCACGCATTTTCCAAAGTCAAAAAATGCAAAATGCTATGAATGCCTTATGGCCCCTATTGCTTTGATGAAACTGAGAAGGTATAGGATAGAAATTGGGGGGCGTAACATAGGCTTGACACCTCAAAATGAAAGTGCAAGATATTTACGCTTTGTTCAGTTAAATATCGCCATGTTAGGTGTAGGAATCAAGGATCTTGCACAAATAGCAACTGCAATTGAATGTTATAAGCTTAAGGGAGGCAGCAGAAGTTTCATGCCTAATGTTGTTCAAGCTAGCGGAGGCATGAATGAGTTATCTAAACTCTATCTTAGAAGGTGTTCAGAGATGGAATGCATTGTTGACAAAATTAATGCTCATGAAGATGCGATTGCCCCAAGATTGGGTGAGTTAGTGCTAACAGACATGGATAATCTTCAACAACTACATCGTGGTCCTTCTTCTGTTAGCTTGTTCCAAAAGCTAGAAACACTAACTATATCCAATTGCCCTCAGTTGCTCCACATATTCCCTGCTGATTGCAACTTAGGCAATCTTAAGTTTCTCAATATTTTCAGTTGTCCGAGGTTGACATCTCTCTTCGCTATCTCTACTATGTGCACTTTGTTGTCCTTACAAGAGCTCCGAATAGAAAGTTGCGGTGAACTGAAGCATGCATTAGAGGGAGAGGGTGATGGTGATGCATGGGAGAATTCTAGATTCCCAAAATTGAAAATTTTGTCTATTGATAAATGCCGCAAATTAGAATCTGTATGCCCGGTCTTTTTAGCTCAAAGGTTTGTACAATTGCAGCGTCTATCCATAACAACTGCTCCTCAGATGAAATTTGTGTTCGGTGAAAATGCTGATGAAGAACAACCACTACGTGACCAAGATGAGATTCAAATAGCTCTTTCTCTTTTGGAATACCTCACACTGACAAATCTTCCAAACCTTGTCGGAATTTGCTCAAAGAGGTATCATCTACGGTGGCTATCTATAAAGACAATAGAAGGGGAGGATTGTCCAAATCTGGAACTTGAGAGCCATCCACTGAGGAATGAAGAACACAGGTCATTGACAACTATAGAAAGTATTCAACTTCATAACTGTGGAGTAGAATCCATTTCCCTCTATAAGACAGGCTCTGAAGAACAATTTCCAACATTTCAATCCCTTAAAAAACTAGTCTTGCGAAATCATGCAAGATTGAAATATGTCTTTTCTGCTCATATGTGTCAAAGTCTTCCAGAGTTAACTTCTGTAACCATATCTTGCTGTGAGGAGTTGGAGGCAATCTTTTTGGAGAATGAAAAGACTCAGAAAAATCTAGCTAATGCAGAATCCTGTCTGCCGAAATTAAAGAGGTTGGAAGTCTTTGAGTGCAACAAGCTTAAATTCATTTTATCTTTCATGATTGGTCCTACTGTCTCAATGCTTCCACAACTAAGCACTCTAACCGTATCAGATTCTTCTCAAATGGAAGAAATTTTCAAATGCTCAAAGGTTGAAGATCATCAGATTGACAGTAGTGAAAAGGAGATTACATTACCAAACCTGAAATCTATGAGACTTGAGAACTTGCCAAGACTTGTTAATGTCTGCCAAGGATTCAAGTTGCAGACAGGGGAGTTTTGCACACTTAACGTTCATGAATGCCCAAAACTTATGCCAATGATGGGTGCAACTATTGATTGGACTAACGAGCGACTCGTAAGGAAGTATGTGTTGAAATACAACCAATTAAATAATAATGAGGCTCTCAATCTTCCGCTTTCTGTTCTGAATGCTGGAGAACTTGATATTCGAAGTCCTGGAGTTGAACACAAGTGGCGAGTGATTGGTGATGATGAGCAAGAAGAAACCAATAACTCAGAAATGTTGAGATCAGAAGAACAAATGGCGAGAGGTCTTGTTCCCACGCAAGTTTTAAGCTTTCAACATCTTCATTCCTTAGAAATTATTAAAAACAAGAAATTAAAACAACTAAAACTGATTATTAAGCTCTAG 3945 0.3888 MAEVGVSLAAKLAEYLVDPTLRRLQYLFCVGKITKNVQIRKEELILKQGRVQERVQEAINRTERIDGEVDRWKNDVKSLIAEVEELEDELGANNGCHRRWYPTWRRYCLCKKLAKTTQRMIDLNTKSDRFNPFSHPVIIQGIEYHSSKGFMFFESTKKAHDELWAALQDDDSSMIGLWGMGGSGKTTLVKEIGKKAKESKLCDEVIIATVTQTLNIRKIQGQIADLLGLELKQETEEGRARRIALKLQSSNKRILIILDDVWDTLNLEDIGNPYRDEGPRNCKILLTTRRQEVCTMMDCQKTISLGLLTEGEAWDLFQTHGRVDDGVRKVAQEVVAECKGLPIAIVAMGKCLRRKGLDEMNVVLHRLRHSKPLDEDKAFTCLKLSYDYLRNAEAKLLFLVCAMFPEDHEIEIEDLFRYGVGLGLCKDADSFEIARSQVRAAINVLVDSSLLMFSVSSRKEKCVKMHDIVRDVALWVATQENSTIMVNNGKEWNKLISDEVIKDCYAISSWYDDGILFQFLSQLGAPKLEFLLLDSVKLVDALHASFEGSTGLKALIMMCKYFHRIELQPQSIQHLSNLQTLRLQGWNLRDISFVVSLTRLEILDLRRSMFKRMPNGIENLNKLKLLDLSYCNIGECCYQVIGRCSQLEELYVSTHFPKSKNAKCYECLMAPIALMKLRRYRIEIGGRNIGLTPQNESARYLRFVQLNIAMLGVGIKDLAQIATAIECYKLKGGSRSFMPNVVQASGGMNELSKLYLRRCSEMECIVDKINAHEDAIAPRLGELVLTDMDNLQQLHRGPSSVSLFQKLETLTISNCPQLLHIFPADCNLGNLKFLNIFSCPRLTSLFAISTMCTLLSLQELRIESCGELKHALEGEGDGDAWENSRFPKLKILSIDKCRKLESVCPVFLAQRFVQLQRLSITTAPQMKFVFGENADEEQPLRDQDEIQIALSLLEYLTLTNLPNLVGICSKRYHLRWLSIKTIEGEDCPNLELESHPLRNEEHRSLTTIESIQLHNCGVESISLYKTGSEEQFPTFQSLKKLVLRNHARLKYVFSAHMCQSLPELTSVTISCCEELEAIFLENEKTQKNLANAESCLPKLKRLEVFECNKLKFILSFMIGPTVSMLPQLSTLTVSDSSQMEEIFKCSKVEDHQIDSSEKEITLPNLKSMRLENLPRLVNVCQGFKLQTGEFCTLNVHECPKLMPMMGATIDWTNERLVRKYVLKYNQLNNNEALNLPLSVLNAGELDIRSPGVEHKWRVIGDDEQEETNNSEMLRSEEQMARGLVPTQVLSFQHLHSLEIIKNKKLKQLKLIIKL 1314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral27g00020 1314 Coils Coil 69 89 - -
Pral27g00020 1314 SUPERFAMILY L domain-like 464 978 - -
Pral27g00020 1314 Gene3D - 386 474 IPR036388 -
Pral27g00020 1314 Gene3D Ribonuclease Inhibitor 513 665 IPR032675 -
Pral27g00020 1314 Gene3D - 307 385 IPR042197 -
Pral27g00020 1314 Gene3D Ribonuclease Inhibitor 943 1159 IPR032675 -
Pral27g00020 1314 PRINTS Disease resistance protein signature 174 189 - -
Pral27g00020 1314 PRINTS Disease resistance protein signature 618 634 - -
Pral27g00020 1314 PRINTS Disease resistance protein signature 338 352 - -
Pral27g00020 1314 PRINTS Disease resistance protein signature 248 262 - -
Pral27g00020 1314 Gene3D Ribonuclease Inhibitor 726 929 IPR032675 -
Pral27g00020 1314 Pfam NB-ARC domain 158 387 IPR002182 GO:0043531
Pral27g00020 1314 Gene3D - 143 304 IPR027417 -
Pral27g00020 1314 FunFam Probable disease resistance protein At1g63360 386 475 - -
Pral27g00020 1314 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 401 IPR027417 -
Pral27g00020 1314 SUPERFAMILY RNI-like 998 1200 - -
Pral27g00020 1314 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 915 1143 - -
Pral27g00020 1314 FunFam Probable disease resistance protein At1g61300 153 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral27g00020 Pral-Chr27 480376 506592 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral27g00020 171 480 WRKY Transcription Factor Family AT5G45050 24.921 1.65e-14 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral27g00020 - - pcin:129317821 1374.76