Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral27g00014 ATGGATGACGCAGGAATATCAGCAGCAGCAAAGCTTGCTGAATATTTGGTGGATCCTACTTTGCACCAATTGCAATATTTGTTTTGTGTTGGCAAAATCACCAGAAATGTTGAGACCAAAAAGGAGGAATTGATACTGAAGCAAGGGAGGGTGCAAGAACTTGTTGAAGAAGCCATTAAGAGGACTGAGAGGATCGATGATGAGGTTAACAAGTGGATGAATGAGGTGGTAAGCCTCATAGCAGAGGTGGAGAGCTCGGTGCAAGAACTAAAGGCCAACAATAACTGCTTCCAACGGTGGTGTCCTACTTGGAGGAGATATCATCTCTGCAAAGTGTTGGTGAAGACAGCCCAGCAGATGACAGAGTTGAATGCAAAGAGTGATCAGCTTGAGCCATTTTCTCATCATGTTATTGTTCCAGATATAGAGTATCACTCTTCTAAGGATTTTATGGTCTTCAGATCAACAGAAATGGCATATGATGAGCTTTGGGAGGCACTGCAAGATAGTGATAGCTTTATTATTGGGTTGTGGGGCATGGGCGGTTCAGGCAAAACCACCTTGGTCAAGGAAGTGGGAAAGAAATCCAAAGAATCAAAGCTGTTTGATCGAGTTATAATCACAACAATTTCCCAAACTCCAAATATAAGGAAGAGCCAAGGTGAAATTGCAGACTTATTGGGACTCGAGTTGAGGGAAGAAAGTGAAGCAGGAAGGGCAAGAAGAATTGCAATGAAATTACAAAGTCCAAAGGAACAAATTCTAATTATATTGGATGACGTGTGGTCTATGCTAAACCTTGAGGACATAGGGAATCCCTTTAGGAATGAAGGTCCAAGAAACTGCAAAGTTCTTTTTACCACGCGTCGCAAGGAGGTATGTACTTTGATGGATTGCCAAAAAACTATTTCATTGGGTCTGCTAACAAAAGATGAAGCTTGGGATCTATTTCAAACTCATGCTAAAGTAGATGATGGTGCAATAGAAGTGGCTCAAGAAGTTGCCATGGAATGTAAGGGGCTACCCATTGCAATTGTGGCTATGGGGAAGTGTTTAAAAGGAAAAGGACTTGATGAGATAAATGTAGTATTGCATAGGTTGAGACATTCAAAGCCAGTTGTTGTGGATGAAGGAGGGAGTGATGCTTATGCTTGTCTCAAGTTAAGCTATAATTATTTGAAAACTGTAGAAGCCAAATTGTTGTTCTTGATATGTGCTCTATTTCCTGAAGATCATGAAATCATCATTGAAGATCTTTTTAGGTATGGGATTGGGTTAGGATTATGCAAAGATGCTGACTCATTTGAAATAGGAAGAAGTCAAGTTATAGCATCTATATATGTTCTCATTGACTCTTCGTTGTTGACGTATTATGTCAACTCTTGGAATGAAAAATGTGTGAAAATGCATGACATGGTTCGTGATGTAGCTTTATGGATAGCACCTAAAGAGCTTGGGACTATTATGGTAAACTGTGCTAAAGAATTTAATGGATTGCATGAAGATGAAGCAGCAAAAGATTGCTATGCAATATCTTCATGGAATAGGAAGAATGAAGTACTTCGATTTCCTTCTCAACTGGACGCTCCAAAGCTTGAGCTTATGTTGATAAATTCAAGCAAACCCATAGATTTATCACGGGCATCATTTGAAGGTGTTAAAGGACTGAAAGTTGTAGCTCTGAACAACAATGGACCATTCTATTTGACAAAATTGCTTCCTCAATCAATACAATGGTTGTCTAATCTTCGAACTTTGCGCTTGCGAGATTGGGATTTAGGTGACATTTCTTTTGTGGTAAGCCTAAAAAGACTTGAAATTCTTGACTTGAAAGGAAGCAGATTCAAAAAATTGCCAAATGGAATTGAAAACCTAATCCATCTAAAACTGCTCGACTTGTCATGGTGTATAGCTGAAGAGTGTTTTTATAAAGCAATAGGAAGGTGTTCACAACTAGAAGAATTGTATGCTTACATAATACACCCTTCAAGATGCACAATTTGTTATGAATGCTTTGTGGGTGTCCCTGCTCTTTCAAAATTGGGAAGGTATACGTTGGAAATGGGGCCACACAACAAGACTATGTTCCAGAATAAAGGCATAAGAGAGATATTCTTTGCAGAGTTAAATATCTCCATCCCAAGTGCAATGATCAAGGATCTTGCACAAAGAGCAATTGCAATTGAATTTTATAAGCTTCAAGGAGGTTGCAAAAGGTTCAGTCCAGATGTGGTTCAAACTGTAGGAGGCATGAATGAGTTAACTAAACTCTGTCTTCAACATTGTTGTGAGATCGAATGCTTTACTGATCAAACTACTCCTCATGAAGACATAGTTGTCCTTAGATTGGTTGAGCTGGTGTTGAAGTATATGGATAATCTAAAACAACTATGTTATGTTCCTTCAAATGTTAGCTTATTCCTAAATCTAGAAAGTCTAAACATAGAAAGTTGCCCTCAATTGGTCAACGTGTTTCCTGGTAAATGTAACTTAGGCAACCTTAAGTACCTCAACATTGTCAACTGTCCGATGTTGACATCCCTCTTCCCTATCTCTGTTGCTTGCACTTTGCTATCGTTAGAACAACTCTCAATAAATGAATGTCATGAATTGAAGCATGTAATTGAGGGAGAGGATGGTATTGTTGACGCATGGGAGGATCCGATGTTCCCAAAATGGGAAATTCTGTCTGTCTGGAATTGTAACCAATTAGAATCTATTTGCCCAAGCTTTTGTGTTCAAGGGTTTACACGATTGAAATCTATATTCATAAAAGATGCTCCTCAGTTGAAATTTGTATTTGGTGAAGCAACTTCAATATGTGATGGAATGGAGACTAGCATAGTGCTTCCACTTTTAGAAAATTTCAGATTGGAAAACCTCCCAAATCTACTCAGAATTTATCCAGAGAGCTATCATCTACTGTGGCCATCTCTAATGAAAGCAGAATGGACAAACTGTCCAAAGATAGAATACTTCATTTGA 2985 0.3873 MDDAGISAAAKLAEYLVDPTLHQLQYLFCVGKITRNVETKKEELILKQGRVQELVEEAIKRTERIDDEVNKWMNEVVSLIAEVESSVQELKANNNCFQRWCPTWRRYHLCKVLVKTAQQMTELNAKSDQLEPFSHHVIVPDIEYHSSKDFMVFRSTEMAYDELWEALQDSDSFIIGLWGMGGSGKTTLVKEVGKKSKESKLFDRVIITTISQTPNIRKSQGEIADLLGLELREESEAGRARRIAMKLQSPKEQILIILDDVWSMLNLEDIGNPFRNEGPRNCKVLFTTRRKEVCTLMDCQKTISLGLLTKDEAWDLFQTHAKVDDGAIEVAQEVAMECKGLPIAIVAMGKCLKGKGLDEINVVLHRLRHSKPVVVDEGGSDAYACLKLSYNYLKTVEAKLLFLICALFPEDHEIIIEDLFRYGIGLGLCKDADSFEIGRSQVIASIYVLIDSSLLTYYVNSWNEKCVKMHDMVRDVALWIAPKELGTIMVNCAKEFNGLHEDEAAKDCYAISSWNRKNEVLRFPSQLDAPKLELMLINSSKPIDLSRASFEGVKGLKVVALNNNGPFYLTKLLPQSIQWLSNLRTLRLRDWDLGDISFVVSLKRLEILDLKGSRFKKLPNGIENLIHLKLLDLSWCIAEECFYKAIGRCSQLEELYAYIIHPSRCTICYECFVGVPALSKLGRYTLEMGPHNKTMFQNKGIREIFFAELNISIPSAMIKDLAQRAIAIEFYKLQGGCKRFSPDVVQTVGGMNELTKLCLQHCCEIECFTDQTTPHEDIVVLRLVELVLKYMDNLKQLCYVPSNVSLFLNLESLNIESCPQLVNVFPGKCNLGNLKYLNIVNCPMLTSLFPISVACTLLSLEQLSINECHELKHVIEGEDGIVDAWEDPMFPKWEILSVWNCNQLESICPSFCVQGFTRLKSIFIKDAPQLKFVFGEATSICDGMETSIVLPLLENFRLENLPNLLRIYPESYHLLWPSLMKAEWTNCPKIEYFI 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral27g00014 994 SUPERFAMILY L domain-like 468 931 - -
Pral27g00014 994 SMART AAA_5 171 320 IPR003593 GO:0016887
Pral27g00014 994 Gene3D Ribonuclease Inhibitor 511 728 IPR032675 -
Pral27g00014 994 PRINTS Disease resistance protein signature 174 189 - -
Pral27g00014 994 PRINTS Disease resistance protein signature 600 616 - -
Pral27g00014 994 PRINTS Disease resistance protein signature 248 262 - -
Pral27g00014 994 PRINTS Disease resistance protein signature 338 352 - -
Pral27g00014 994 Gene3D - 307 389 IPR042197 -
Pral27g00014 994 Gene3D - 390 478 IPR036388 -
Pral27g00014 994 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 144 405 IPR027417 -
Pral27g00014 994 Gene3D - 143 305 IPR027417 -
Pral27g00014 994 Pfam NB-ARC domain 159 387 IPR002182 GO:0043531
Pral27g00014 994 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 860 994 - -
Pral27g00014 994 FunFam Probable disease resistance protein At1g61300 139 302 - -
Pral27g00014 994 Coils Coil 55 93 - -
Pral27g00014 994 Gene3D Ribonuclease Inhibitor 740 881 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral27g00014 Pral-Chr27 361123 368455 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral27g00014 175 642 WRKY Transcription Factor Family AT5G45050 23.529 9.37e-16 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral27g00014 - - pcin:129301500 1193.33