Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral27g00012 ATGAAATTTACCTTTCAGGAATTGTCGGTACATATTGGAATGGATGACGCAGGAATATCAGCAGCAGCAAAGCTTGCTGAATATTTGGTGGATCCTACTTTGCACCAATTGCAATATTTGTTTTGTGTTGGCAAAATCACCAGAAATGTTGAGACCAAAAAGGAGGAATTGATACTGAAGCAAGGGAGGGTGCAAGAACTTGTTGAAGAAGCCATTAAGAGGACTGAGAGGATCGATGATGAGGTTAACAAGTGGATGAATGAGGTGGTAAGCCTCATAGCAGAGGTGGAGAGCTCGGTGCAAGAACTAAAGGCCAACAATAACTGCTTCCAACGGTGGTGTCCTACTTGGAGGAGATATCATCTCTGCAAAGTGTTGGTGAAGACAGCCCAGCAGATGACAGAGTTGAATGCAAAGAGTGATCAGCTTGAGCCATTTTCTCATCATGTTATTGTTCCAGATATAGAGTATCACTCTTCTAAGGATTTTATGGTCTTCAGATCAACAGAAATGGCATATGATGAGCTTTGGGAGGCACTGCAAGATAGTGATAGCTTTATTATTGGGTTGTGGGGCATGGGCGGTTCAGGCAAAACCACCTTGGTCAAGGAAGTGGGAAAGAAATCCAAAGAATCAAAGCTGTTTGATCGAGTTATAATCACAACAATTTCCCAAACTCCAAATATAAGGAAGAGCCAAGGTGAAATTGCAGACTTATTGGGACTCGAGTTGAGGGAAGAAAGTGAAGCAGGAAGGGCAAGAAGAATTGCAATGAAATTACAAAGTCCAAAGGAACAAATTCTAATTATATTGGATGACGTGTGGTCTATGCTAAACCTTGAGGACATAGGGAATCCCTTTAGGAATGAAGGTCCAAGAAACTGCAAAGTTCTTTTTACCACGCGTCGCAAGGAGGTATGTACTTTGATGGATTGCCAAAAAACTATTTCATTGGGTCTGCTAACAAAAGATGAAGCTTGGGATCTATTTCAAACTCATGCTAAAGTAGATGATGGTGCAATAGAAGTGGCTCAAGAAGTTGCCATGGAATGTAAGGGGCTACCCATTGCAATTGTGGCTATGGGGAAGTGTTTAAAAGGAAAAGGACTTGATGAGATAAATGTAGTATTGCATAGGTTGAGACATTCAAAGCCAGTTGTTGTGGATGAAGGAGGGAGTGATGCTTATGCTTGTCTCAAGTTAAGCTATAATTATTTGAAAACTGTAGAAGCCAAATTGTTGTTCTTGATATGTGCTCTATTTCCTGAAGATCATGAAATCATCATTGAAGATCTTTTTAGGTATGGGATTGGGTTAGGATTATGCAAAGATGCTGACTCATTTGAAATAGGAAGAAGTCAAGTTATAGCATCTATATATGTTCTCATTGACTCTTCGTTGTTGACGTATTATGTCAACTCTTGGAATGAAAAATGTGTGAAAATGCATGACATGGTTCGTGATGTAGCTTTATGGATAGCACCTAAAGAGCTTGGGACTATTATGGTAAACTGTGCTAAAGAATTTAATGGATTGCATGAAGATGAAGCAGCAAAAGATTGCTATGCAATATCTTCATGGAATAGGAAGAATGAAGTACTTCGATTTCCTTCTCAACTGGACGCTCCAAAGCTTGAGCTTATGTTGATAAATTCAAGCAAACCCATAGATTTATCACGGGCATCATTTGAAGGTGTTAAAGGACTGAAAGTTGTAGCTCTGAACAACAATGGACCATTCTATTTGACAAAATTGCTTCCTCAATCAATACAATGGTTGTCTAATCTTCGAACTTTGCGCTTGCGAGATTGGGATTTAGGTGACATTTCTTTTGTGGTAAGCCTAAAAAGACTTGAAATTCTTGACTTGAAAGGAAGCAGATTCAAAAAATTGCCAAATGGAATTGAAAACCTAATCCATCTAAAACTGCTCGACTTGTCATGGTGTATAGCTGAAGAGTGTTTTTATAAAGCAATAGGAAGGTGTTCACAACTAGAAGAATTGTATGCTTACATAATACACCCTTCAAGATGCACAATTTGTTATGAATGCTTTGTGGGTGTCCCTGCTCTTTCAAAATTGGGAAGGTATACGTTGGAAATGGGGCCACACAACAAGACTATGTTCCAGAATAAAGGCATAAGAGAGATATTCTTTGCAGAGTTAAATATCTCCATCCCAAGTGCAATGATCAAGGATCTTGCACAAAGAGCAATTGCAATTGAATTTTATAAGCTTCAAGGAGGTTGCAAAAGGTTCAGTCCAGATGTGGTTCAAACTGTAGGAGGCATGAATGAGTTAACTAAACTCTGTCTTCAACATTGTTGTGAGATCGAATGCTTTACTGATCAAACTACTCCTCATGAAGACATAGTTGTCCTTAGATTGGTTGAGCTGGTGTTGAAGTATATGGATAATCTAAAACAACTATGTTATGTTCCTTCAAATGTTAGCTTATTCCTAAATCTAGAAAGTCTAAACATAGAAAGTTGCCCTCAATTGGTCAACGTGTTTCCTGGTAAATGTAACTTAGGCAACCTTAAGTACCTCAACATTGTCAACTGTCCGATGTTGACATCCCTCTTCCCTATCTCTGTTGCTTGCACTTTGCTATCGTTAGAACAACTCTCAATAAATGAATGTCATGAATTGAAGCATGTAATTGAGGGAGAGGATGGTATTGTTGACGCATGGGAGGATCCGATGTTCCCAAAATGGGAAATTCTGTCTGTCTGGAATTGTAACCAATTAGAATCTATTTGCCCAAGCTTTTGTGTTCAAGGGTTTACACGATTGAAATCTATATTCATAAAAGATGCTCCTCAGTTGAAATTTGTATTTGGTGAAGCAACTTCAATATGTGATGGAATGGAGACTAGCATAGTGCTTCCACTTTTAGAAAATTTCAGATTGGAAAACCTCCCAAATCTACTCAGAATTTATCCAGAGAGCTATCATCTACTGTGGCCATCTCTAATGAAAGCAGAATGGACAAACTGTCCAAAGATAGAATACTTCATTTGA 3024 0.3866 MKFTFQELSVHIGMDDAGISAAAKLAEYLVDPTLHQLQYLFCVGKITRNVETKKEELILKQGRVQELVEEAIKRTERIDDEVNKWMNEVVSLIAEVESSVQELKANNNCFQRWCPTWRRYHLCKVLVKTAQQMTELNAKSDQLEPFSHHVIVPDIEYHSSKDFMVFRSTEMAYDELWEALQDSDSFIIGLWGMGGSGKTTLVKEVGKKSKESKLFDRVIITTISQTPNIRKSQGEIADLLGLELREESEAGRARRIAMKLQSPKEQILIILDDVWSMLNLEDIGNPFRNEGPRNCKVLFTTRRKEVCTLMDCQKTISLGLLTKDEAWDLFQTHAKVDDGAIEVAQEVAMECKGLPIAIVAMGKCLKGKGLDEINVVLHRLRHSKPVVVDEGGSDAYACLKLSYNYLKTVEAKLLFLICALFPEDHEIIIEDLFRYGIGLGLCKDADSFEIGRSQVIASIYVLIDSSLLTYYVNSWNEKCVKMHDMVRDVALWIAPKELGTIMVNCAKEFNGLHEDEAAKDCYAISSWNRKNEVLRFPSQLDAPKLELMLINSSKPIDLSRASFEGVKGLKVVALNNNGPFYLTKLLPQSIQWLSNLRTLRLRDWDLGDISFVVSLKRLEILDLKGSRFKKLPNGIENLIHLKLLDLSWCIAEECFYKAIGRCSQLEELYAYIIHPSRCTICYECFVGVPALSKLGRYTLEMGPHNKTMFQNKGIREIFFAELNISIPSAMIKDLAQRAIAIEFYKLQGGCKRFSPDVVQTVGGMNELTKLCLQHCCEIECFTDQTTPHEDIVVLRLVELVLKYMDNLKQLCYVPSNVSLFLNLESLNIESCPQLVNVFPGKCNLGNLKYLNIVNCPMLTSLFPISVACTLLSLEQLSINECHELKHVIEGEDGIVDAWEDPMFPKWEILSVWNCNQLESICPSFCVQGFTRLKSIFIKDAPQLKFVFGEATSICDGMETSIVLPLLENFRLENLPNLLRIYPESYHLLWPSLMKAEWTNCPKIEYFI 1007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral27g00012 1007 Gene3D Ribonuclease Inhibitor 842 1006 IPR032675 -
Pral27g00012 1007 SMART AAA_5 184 333 IPR003593 GO:0016887
Pral27g00012 1007 Gene3D - 320 402 IPR042197 -
Pral27g00012 1007 Gene3D Ribonuclease Inhibitor 531 837 IPR032675 -
Pral27g00012 1007 SUPERFAMILY L domain-like 481 944 - -
Pral27g00012 1007 FunFam Probable disease resistance protein At1g61300 152 315 - -
Pral27g00012 1007 Gene3D - 403 491 IPR036388 -
Pral27g00012 1007 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 157 418 IPR027417 -
Pral27g00012 1007 Gene3D - 156 318 IPR027417 -
Pral27g00012 1007 Pfam NB-ARC domain 172 400 IPR002182 GO:0043531
Pral27g00012 1007 Coils Coil 68 106 - -
Pral27g00012 1007 PRINTS Disease resistance protein signature 261 275 - -
Pral27g00012 1007 PRINTS Disease resistance protein signature 351 365 - -
Pral27g00012 1007 PRINTS Disease resistance protein signature 613 629 - -
Pral27g00012 1007 PRINTS Disease resistance protein signature 187 202 - -
Pral27g00012 1007 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 873 1007 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral27g00012 Pral-Chr27 361123 368455 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral27g00012 188 655 WRKY Transcription Factor Family AT5G45050 23.529 1.17e-15 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral27g00012 - - pcin:129301500 1193.33