Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral27g00010 ATGGCTGAGGTCGGAGCGTCAGTAGCAGCAAAACTTGCTGAATATTTGGTGCATCCAACTTTACAACAGCTGCAGTATATGTTCTATGTTAGCAAGATCACCGGAAACGTTGAGATCAAAAAAAGGAAGCTAATACTAAAGCAGGGAAAGGTGCAAGAATGTGTTCAAGAGGCCATCAATAGGACTGAGAGGATTGATGGTGAGGTTACCAAGTGGAAGAATGACGTGAATAGCCTTATAGCAGAGGTGGAGAAACTGGAGGAAGAACTAAGGGCCAACAATGGTTGCCTTCAAGGGTGGTGTCCTACTTGGAGGAGATATTGTCTCTGCAAAATGTTGGCTAAGACAACTCAGAGGATGATTGATCTAGATATAAAGAGTGATCACTTCAATCCATTTTCCCATCCTGTTACTATTTCTGATATTGACTATCACTCTTCTCAAAATTTTAAGCTCTTCAATTCTACGCAAAAGGCTTTTGATCAATTGTGGGAGGCACTGCAAGATGATGGTAACTCCATGATTGGGTTATGGGGGATGGGAGGGTCAGGGAAAACCACCTTGGTGAAAGAAGTGGGAAAGAAAGCCAAAAAGTCACAGCTATTTGATCGAGTTGTGCTCACGACATTTTCTCAAAGCCTAGACATAAGAAAAATTCAAGGTGAAATTGCTGACACGTTGGGGCTTGAATTGAAGGAAGAAACCGAAATAGGCAGAGCGAAAAGAATAGCTCTACGATTACAAAGTGGAGAACGAATTTTGATAATACTAGATGACATATGGGCTATGCTGAACCTTGAGGACATAGGGATTCCCATTGAAAGAAATCATCAAAGAAGTTGCAAGGTTATCTTGACCACGCGTCGTCTAGATGTGTGTACCTTGATGGAATGCCAAAACAAGATTCAACTTCATTTGTTAAAAGAAGATGAAGCATGGACTTTGTTTCAAACTCATGCCAATGTTGATGAAGCTGCTAAGGAATGTGTGGCACGAGCAATTGCTAGGGAATGTAAAGGCCTACCTATTGCAATTGTAGCTGTAGGAAGTTGCTTGAAAGGCAAAGGAATTGATGAGATGAATATAGTGTTGTGTAGGTTGAGAAATGCAAAGCCAAACAATATAGATAAAGGTGTGAGGGATGCTTTTGCTTGTCTTGAATTAAGCTATGATTTTTTGGCAACTCTAGAAGCCCAGCGGTTATTGCTAATATGTGCTATGTTTCCTGAAGACCATGACATTGTTGTTGAAGACCTTTTTAGATATGGAGTGGGATTAGGCCTATGCAAAGATGCAGACTCATTTCAAACAGGGAGGAGCCAAGTTAGAGCAGCTATAAATGATCTCATTGACTCCTCATTGTTGATGCATTCTTCTCTAAAGTTCAACGTGCATGCACCAACACATGTGAAATTACATGATATGGTTCGTGATGTTGCATTGTGGATAGCATCTAAAAAAGATGGTAATATTATGCATCTTGCACAAAGAGCAACCAAGATTGTATTTTATGAGCTTGAAGGAGGTAGCAAAAGTTTCATCCCTGATATTGTCCAAGCTGTAGGAGGCATGAAGGAGTTGAGTAGACTCTGTCTTCAAAGATGTTCAAAGATTGAATGCATTATTGACGAAACTACTCTTCACGAAGATGCAGTTGTCCTCAAATTGAATGAGTTAGTGCTAAGAGATATGGATAATCTTGAACGACTATGTCGTGCTCCTTCTCCTTTTAGCTTGTTCGAAAAGTTGGAAAGATTAACCATATTCAACTGTCCTCAGTTGCTCCACATATTCCCTGTCGACTGCAGCTTAGGCAATCTTAAGGTTCTCAATGTTAACAAGTGTCCAATGTTAACATCTCTCTTTCCTGTCTCTGCTGTTTGCACACTGCTATCCTTAGAAGAGCTCCGAATAAAATGTTGCAATGAATTGAAGCACTTATTAGATGAAGATGGTGGTGTTGATGCATGGCTCAGAGATTTGTACAATTGCAAGATCTATCGGTAA 2007 0.4026 MAEVGASVAAKLAEYLVHPTLQQLQYMFYVSKITGNVEIKKRKLILKQGKVQECVQEAINRTERIDGEVTKWKNDVNSLIAEVEKLEEELRANNGCLQGWCPTWRRYCLCKMLAKTTQRMIDLDIKSDHFNPFSHPVTISDIDYHSSQNFKLFNSTQKAFDQLWEALQDDGNSMIGLWGMGGSGKTTLVKEVGKKAKKSQLFDRVVLTTFSQSLDIRKIQGEIADTLGLELKEETEIGRAKRIALRLQSGERILIILDDIWAMLNLEDIGIPIERNHQRSCKVILTTRRLDVCTLMECQNKIQLHLLKEDEAWTLFQTHANVDEAAKECVARAIARECKGLPIAIVAVGSCLKGKGIDEMNIVLCRLRNAKPNNIDKGVRDAFACLELSYDFLATLEAQRLLLICAMFPEDHDIVVEDLFRYGVGLGLCKDADSFQTGRSQVRAAINDLIDSSLLMHSSLKFNVHAPTHVKLHDMVRDVALWIASKKDGNIMHLAQRATKIVFYELEGGSKSFIPDIVQAVGGMKELSRLCLQRCSKIECIIDETTLHEDAVVLKLNELVLRDMDNLERLCRAPSPFSLFEKLERLTIFNCPQLLHIFPVDCSLGNLKVLNVNKCPMLTSLFPVSAVCTLLSLEELRIKCCNELKHLLDEDGGVDAWLRDLYNCKIYR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral27g00010 668 Pfam NB-ARC domain 157 391 IPR002182 GO:0043531
Pral27g00010 668 FunFam Probable disease resistance protein At1g61300 139 301 - -
Pral27g00010 668 Gene3D Ribonuclease Inhibitor 510 661 IPR032675 -
Pral27g00010 668 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 403 IPR027417 -
Pral27g00010 668 Coils Coil 69 93 - -
Pral27g00010 668 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 508 648 - -
Pral27g00010 668 SMART AAA_5 171 308 IPR003593 GO:0016887
Pral27g00010 668 SUPERFAMILY L domain-like 466 645 - -
Pral27g00010 668 Gene3D - 306 389 IPR042197 -
Pral27g00010 668 Gene3D - 143 303 IPR027417 -
Pral27g00010 668 Gene3D - 390 481 IPR036388 -
Pral27g00010 668 PRINTS Disease resistance protein signature 247 261 - -
Pral27g00010 668 PRINTS Disease resistance protein signature 338 352 - -
Pral27g00010 668 PRINTS Disease resistance protein signature 174 189 - -
Pral27g00010 668 PRINTS Disease resistance protein signature 602 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral27g00010 Pral-Chr27 327442 330225 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral27g00010 175 487 WRKY Transcription Factor Family AT5G45050 24.768 2.23e-09 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral27g00010 - - pcin:129317508 759.599