Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral27g00004 ATGGCAGAGGTGGGAGTGTCGTTAGCGGCAAAACTTGCTGAATATCTAGTGGATCCAACTTTACGGCGGTTGCAGTATTTGTTCTGTGTCGGCAAAATCACCAAAAACGTTCAGATCAGAAAGGAGGAGCTGATACTCAAGCAAGGAAGGGTACAGGAACGTGTTCAAGAGGCCATCAACAGGACTGAGAGGATTGATGGTGAGGTTGACAGGTGGAAGAATGATGTAAAGAGTCTCATAGCAGAGGTGGAGGAATTGGAGGACGAACTAGGGGCCAACAATGGCTGTCATCGACGATGGTATCCTACTTGGAGGAGATATTGTCTCTGCAAAAAGTTGGCTAAGACAACCCAGAGGATGATTGATCTAAACACAAAGAGTGATCGCTTCAATCCATTTTCTCATCCTGTTATTATTCAAGGCATAGAATATCACTCTTCTAAAGGTTTTATGTTCTTTGAGTCAACGAAAAAAGCACATGATGAACTATGGGCAGCATTGCAAGATGATGATAGCTCTATGATCGGGTTGTGGGGTATGGGCGGTTCAGGCAAAACCACATTGGTAAAGGAAATAGGAAAGAAAGCCAAAGAATCAAAGCTATGTGATGAAGTTATAATTGCAACAGTAACCCAAACTCCAAATATCAGGAAGATTCAAGGTCAAATTGCGGACTTATTGGGACTTGAGCTGAAGCAAGAAACTGAAGAGGGTAGGGCAAGAAGAATTGCATTGAAATTACAAAGTTCAAACAAACAAATTTTGATTATATTAGATGATGTATGGGATACGCTGAACCTTGAGGATATAGGGAATCCCTATAGGGATGAAGGTCCAAGAAACTGTAAAATTCTTCTCACCACACGTCGTCAAGAGGTGTGTACTATGATGGATTGCCAGAAAACAATTTCCCTGGGTTTGTTAACAGAAGGTGAAGCTTGGGATCTATTTCAAACTCATGGTAGAGTAGATGATGGTGTTAGAAAAGTGGCTCAAGAAGTTGTCGCTGAATGTAAGGGATTACCCATTGCAATTGTGGCCATGGGGAAGTGCTTAAGAAGAAAAGGACTTGATGAGATGAATGTAGCATTGCACAGATTGAGACATTCAAAGCCACTTGATGAGGATAAAGCCTTTACTATTCTCAAGTTAAGCTATGATTACTTGAAAAATTCAGAGGCTAAGTTGTTGTTCTTGGTATGCGCCATGTTTCCTGAAGATCATGAAATCGAAATTGAAGATCTTTTTAGATATGGAGTTGGATTGGGCCTATGCAAAGATGCTGACTCATTTGAAATAGCAAGGAGCCAAGTTAGAGCAGCTATAAATGTTCTCGTTGACTCTTCATTGTTGATGTTTTCTGTCAACTTCAGAAAAGAAAAATGTGTGAAAATGCATGACATAGTTCGTGATGTAGCTTTATGGGTAGCAACTCAAGAGAATAGTACCATTATGGTAAACAATGGAAAGGAATGGAATAGATTGATTTCTGATGAAGTTATAAAAGATTGCTATGCTATATCTTCATGGTATGATGATAGTATATTATTTCAATTTTTGTCTCAACTGGGTGCTCCAAAACTTGAGTTTCTATTATTAGATTCTGTGAAACTTGTTGATACATTACATGCATCATTTGAAGGCTCTACAGGACTCAAGGCATTGATTATGATGTGCACGTGTTTGCATAGGATTGAGCTACAACCTCAATCAATTCAACACTTGTCTAATCTTCGGACTTTGCGATTGCAAGGTTGGAATTTACATGACATCTCTTTTGTGATAAGCCTTACAAGACTTGAAATTCTTGACTTGCAAATAAGTATGTTTGAAAGATTGCCAAATGGAATTGAAAATTTAAACAAGCTGAAGTTGTTAGATTTGTCAGATTGTAAGATAAGTGAATGTTGCTACAAAGTAATAGGAAGGTGCTCACAGTTAGAAGAGTTGTATGTTTCCAGGCATTTTCGACACTCAAAAAATGCAAATTGCTATGAATACCTTGTGGCCACCACTACTTTGATGAAAGTGAGAAGGTATAGGTTGGAAATGGGGAGGCCTGAAATACAGTCAATATCTCGTAATGAAAGCACAAGATATTTATGCTTGGGTCAGTTAAAAATCTCCATGTTAGCTGCAAGAATCAAGGATCTTGCGCGAAGAGCAACTGCAATTGAATTTCATGAGCTTGAGGGAGGCAGCAGAAGTTTCATGCCTAATGTTGTTCAAGCTATTGGAGCCATGAATGAGTTAACTAAGCTCTGTCTTAGAAGGTGTTCAGAGATGGAATGCATTGTTGACAAAATTAATACTCATGAAGATGCGATTGCCCCAGGATTGGATGAGTTAGTGCTAAAAGATATGGATAATCTTCAACAACTACATCGTGGTCTTTCTTCTTTTAGCTTGTTCCAAAAGCTGGAAAGACTAACTATATCCAATTGCCCTCAGTTGCTCCATATATTCCCTGCTGATTGCAACTTAGGCAATCTTAAGTTTCTCAATATTTCTGGTTGTCCGAGGTTGACATCTCTCTTCCCTGTCTCTGCTGTGTGCACTCTGCTGTCCTTACAAGAGCTCCGAATAGAAAGGTGCAGTGAACTGAAGCATGTAATAGAAGGAGAGGTTGATGGTGATGCATGGGAGAATTTGAGCTTCCCAAAATTGAAAATTTTGTCTGTTGATAATTGCTGCAAATTAGAATCTAACAACCACTGCGTGATCAAGATGAGACTCAAATAG 2742 0.392 MAEVGVSLAAKLAEYLVDPTLRRLQYLFCVGKITKNVQIRKEELILKQGRVQERVQEAINRTERIDGEVDRWKNDVKSLIAEVEELEDELGANNGCHRRWYPTWRRYCLCKKLAKTTQRMIDLNTKSDRFNPFSHPVIIQGIEYHSSKGFMFFESTKKAHDELWAALQDDDSSMIGLWGMGGSGKTTLVKEIGKKAKESKLCDEVIIATVTQTPNIRKIQGQIADLLGLELKQETEEGRARRIALKLQSSNKQILIILDDVWDTLNLEDIGNPYRDEGPRNCKILLTTRRQEVCTMMDCQKTISLGLLTEGEAWDLFQTHGRVDDGVRKVAQEVVAECKGLPIAIVAMGKCLRRKGLDEMNVALHRLRHSKPLDEDKAFTILKLSYDYLKNSEAKLLFLVCAMFPEDHEIEIEDLFRYGVGLGLCKDADSFEIARSQVRAAINVLVDSSLLMFSVNFRKEKCVKMHDIVRDVALWVATQENSTIMVNNGKEWNRLISDEVIKDCYAISSWYDDSILFQFLSQLGAPKLEFLLLDSVKLVDTLHASFEGSTGLKALIMMCTCLHRIELQPQSIQHLSNLRTLRLQGWNLHDISFVISLTRLEILDLQISMFERLPNGIENLNKLKLLDLSDCKISECCYKVIGRCSQLEELYVSRHFRHSKNANCYEYLVATTTLMKVRRYRLEMGRPEIQSISRNESTRYLCLGQLKISMLAARIKDLARRATAIEFHELEGGSRSFMPNVVQAIGAMNELTKLCLRRCSEMECIVDKINTHEDAIAPGLDELVLKDMDNLQQLHRGLSSFSLFQKLERLTISNCPQLLHIFPADCNLGNLKFLNISGCPRLTSLFPVSAVCTLLSLQELRIERCSELKHVIEGEVDGDAWENLSFPKLKILSVDNCCKLESNNHCVIKMRLK 913
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral27g00004 913 Coils Coil 69 89 - -
Pral27g00004 913 PRINTS Disease resistance protein signature 338 352 - -
Pral27g00004 913 PRINTS Disease resistance protein signature 174 189 - -
Pral27g00004 913 PRINTS Disease resistance protein signature 618 634 - -
Pral27g00004 913 PRINTS Disease resistance protein signature 248 262 - -
Pral27g00004 913 Gene3D Ribonuclease Inhibitor 670 912 IPR032675 -
Pral27g00004 913 Gene3D - 307 385 IPR042197 -
Pral27g00004 913 SUPERFAMILY L domain-like 464 903 - -
Pral27g00004 913 Gene3D Ribonuclease Inhibitor 511 667 IPR032675 -
Pral27g00004 913 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 903 - -
Pral27g00004 913 Gene3D - 386 474 IPR036388 -
Pral27g00004 913 FunFam Probable disease resistance protein At1g61300 153 302 - -
Pral27g00004 913 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 401 IPR027417 -
Pral27g00004 913 FunFam Probable disease resistance protein At1g63360 386 475 - -
Pral27g00004 913 Pfam NB-ARC domain 158 387 IPR002182 GO:0043531
Pral27g00004 913 Gene3D - 148 305 IPR027417 -
Pral27g00004 913 SMART AAA_5 171 373 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral27g00004 Pral-Chr27 63673 66517 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral27g00004 175 847 WRKY Transcription Factor Family AT5G45050 24.098 6.95e-15 77.4