Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2799g00024 ATGGAATGCAATAAGGATGAGGCCACCAGAGCTAAAGAAATTGCCGAGAGGAAGTTTGTTGCAAAGGATATGCGGGGGGCAAAGAAGTTTGCTTTAAAGGCCCAAACATTGTTTCCTGAGCTTGAGGGTATTTCTCAAATGCTAGCTACACTTGATGTGTATATTTCTGCAGACAATAAAATAAATGGCGAAGCAGATTGGTATGGTATACTCGGTGCAGATCCTCGGGCTGATGACGAAACAATCCGGAAACAATATAGGAAGCTGGCTCTCACACTCCACCCTGATAAGAACAAGTCTATTGGGGCTGATGGGGCATTTAAGTTTATTTCGGAGGCGTGGAGTTTGCTGTCAGATAAGGCTAAAAAGGTAGCATATGATCAGAAGAGAAACACAAAAGTGCAGAAGGTTTCGACAAAGTCTTCTGGTGCATCAGCACATCAAGGGACTAATGGGAATTTCAATTTTGCAAAAACTACCACTTCTAGTGCCAGAGCTCATAAACATACTACTAAACCAGATTCAACTTCAACTCACAAATCAAAATCAAATACTTTCTGGACTGTTTGCAATCGATGCAAAATGCAGTATGAATATCTTAGAGTTTATCTTAATTTGAAACTCCTGTGTCCCAATTGTCATGGGGCATTTTTGGCTGTAGAAACATCTCCTCCACCTGCAAGTGGTGTAAGACCCGCCACCTCATTTAACTTTTCCCGGCAGCAGCAAAATTTCAATAACCCAGCGCCTAGTAAAAGCAAGTCTAAAGCAGGAAAGAACAAGCCAACCTCGAATGTTGGAGCAGGTTATGGTAATACTGATTCCTATAACCATACTGATTTCCAGTGGGCTCCATTTTCGAAAACTTCTGGTGTTTCAACAGCAGCTCAAGCTGCAAGTGTGGTCCAACAGGCATATGAGAAAGTGAAGCGGGAGCGTGAGGAGGCACAAGCAGCTACAAAAAGGGAACAGGCCTTACGAAGGAAGCAGCATGCTTCTAAAAAAGGTAATATGAATCCTACGAAGAGAAGAAGAGGCATGGAGGATTCTGGTGCGAGCAGCCATGGTAAGGAACCTTCAAATCAAGCAGGAATGAGAAATGGAGTAGTAGGAGCAGGTAGCTCATGTGGTTCTAAACCTGGTAATTTTGATCGCTTCTCAATTAATGGTAGCTTGAAGACCAGTGGTGCAGGAACTTCCGAGCTTGAGCTTAATAATCTTCTTATGGTGAGAGCTAGAAAAGAGATTGGCGAGAAACTGAAGGATATTCAGTCAAATACTATTTCCAAGAGAGCAATGACAGAGAGTAGAAATGGAAGTGAGACAGAAAATGAGAAAGGAGAAAAAGTTATATGTAGCTCAGAGAGATGTGATCAAAACAACCTCTGCAATTCTAACAATAGGAATAGTGAATTCCATGCCACTGAGATTTCTGCTGGAACTACTAGTGCTAATGTGGACATGAAAACCATGACAATTGATATCCCTGATCCTGATTTTCATGATTTTGATCAGGATCGAACTGATAGGTCTTTTGGTGAAAATCAGGTATGGGTTGCATATGATGATGATGGGATGCCTCGAATTTATGCTATGATTCACAGTGTGATTTCTTCGAGTCCATTAAAGATGCAGATCAGTTGGCTCAATTCAAAGACCAATGATGAACTGGCCCCTCTAAATTGGATCATTTCAGGCTTTTCTAAAACTTGCGGAGAGTTTAGAATGGGTAGAAATGAAATCAATAACTCACTTAATTCTTTTTCTCATAAGGTTAGATGGAGAAAGGGTGCTCATGGAGCCATTTGTATTTATCCCATGAAAGGGGATGTTTGGGCTCTTTATAGGAATTGGTCACCTGATTGGAATGAGCTGACAGCAGATGAGGTGATACACAAGTATGATATGGTTGAGGTACTTGAGGATTTTAGTGAAGAAAATGGTGTTATGGTCATTCCCCTAGTAAAAGTGGCTGGCTTCAAGACATTATTTCGCCGGCACTTGGACCCAGGAGAAATTAGGATCATTCCAAGAGAAGAGATGTTTCGGTTCTCTCATCAGGTCCCTTCATACTTACACAGGGGTAAAGAAACACCAGATATCGTAAGGGGTTGTTGGGAGTTAGACCCAGCTGCTACTCCATCTGAACTTCTTGAAGTTATAAAAGCTGTAGAAGAGGAAGAAATTGTAGGCGAGGAAGGTAGTCCTATAAAAGAAACAACAAATGATGACATTAAAAGACCTAATGATGAGGAAATGATAAATGACACAGGAAAATTTGGAAATGAGAGGGAGAAAAATGATAAAGGTGTTAACGAAATTGGACCTTTGGAAGAGGACAAATAG 2346 0.4113 MECNKDEATRAKEIAERKFVAKDMRGAKKFALKAQTLFPELEGISQMLATLDVYISADNKINGEADWYGILGADPRADDETIRKQYRKLALTLHPDKNKSIGADGAFKFISEAWSLLSDKAKKVAYDQKRNTKVQKVSTKSSGASAHQGTNGNFNFAKTTTSSARAHKHTTKPDSTSTHKSKSNTFWTVCNRCKMQYEYLRVYLNLKLLCPNCHGAFLAVETSPPPASGVRPATSFNFSRQQQNFNNPAPSKSKSKAGKNKPTSNVGAGYGNTDSYNHTDFQWAPFSKTSGVSTAAQAASVVQQAYEKVKREREEAQAATKREQALRRKQHASKKGNMNPTKRRRGMEDSGASSHGKEPSNQAGMRNGVVGAGSSCGSKPGNFDRFSINGSLKTSGAGTSELELNNLLMVRARKEIGEKLKDIQSNTISKRAMTESRNGSETENEKGEKVICSSERCDQNNLCNSNNRNSEFHATEISAGTTSANVDMKTMTIDIPDPDFHDFDQDRTDRSFGENQVWVAYDDDGMPRIYAMIHSVISSSPLKMQISWLNSKTNDELAPLNWIISGFSKTCGEFRMGRNEINNSLNSFSHKVRWRKGAHGAICIYPMKGDVWALYRNWSPDWNELTADEVIHKYDMVEVLEDFSEENGVMVIPLVKVAGFKTLFRRHLDPGEIRIIPREEMFRFSHQVPSYLHRGKETPDIVRGCWELDPAATPSELLEVIKAVEEEEIVGEEGSPIKETTNDDIKRPNDEEMINDTGKFGNEREKNDKGVNEIGPLEEDK 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2799g00024 781 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pral2799g00024 781 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pral2799g00024 781 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pral2799g00024 781 MobiDBLite consensus disorder prediction 136 166 - -
Pral2799g00024 781 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Pral2799g00024 781 PANTHER BNAC03G44070D PROTEIN 1 714 - -
Pral2799g00024 781 MobiDBLite consensus disorder prediction 312 326 - -
Pral2799g00024 781 MobiDBLite consensus disorder prediction 730 781 - -
Pral2799g00024 781 Coils Coil 299 329 - -
Pral2799g00024 781 MobiDBLite consensus disorder prediction 136 182 - -
Pral2799g00024 781 SUPERFAMILY Chaperone J-domain 63 148 IPR036869 -
Pral2799g00024 781 Pfam DnaJ domain 66 127 IPR001623 -
Pral2799g00024 781 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Pral2799g00024 781 CDD DnaJ 66 119 IPR001623 -
Pral2799g00024 781 Gene3D DnaJ domain 63 178 IPR036869 -
Pral2799g00024 781 MobiDBLite consensus disorder prediction 241 271 - -
Pral2799g00024 781 SMART dnaj_3 65 122 IPR001623 -
Pral2799g00024 781 Pfam Domain of unknown function (DUF3444) 491 696 IPR024593 -
Pral2799g00024 781 MobiDBLite consensus disorder prediction 312 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2799g00024 Pral-Chr2799 215916 221678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2799g00024 4 229 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 35.470 1.22e-34 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2799g00024 - - gmx:100816712 934.865