Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2799g00013 ATGGGTTTTTCAGCTCTTGTCCTTCTCTTCTCTCTCCTGTTCTTTCTCTCTCACCCAGCACGGGTCTGTGGGAATGCAGAGCTCAGAGCTCTCATGGACATGAAAGCTGCTCTTGACCCAGAAAGCCGTTTTCTTTCTTCTTGGACTTCCCATGGGAATCCATGCGGCGGTTCTTTTGAAGGAGTGGCTTGCAACGAGAAGGGTCAAGTTGCCAACATTTCCTTGCAGGGGAAGGGCCTCTCTGGGAAGCTGTCGCCCGCCATTGATGGCCTCAAACACTTGACAGGGCTATACTTGCATTATAACTCTCTCTACGGTGAGATACCAAAAGAAATCGCCAACTTGGCTGAGCTCTCTGACTTGTATTTGAATGTGAATCACTTCACTGGGGAAATCCCAACTGAGATCGGCAATATGGAGAACTTGCAAGTTTTGCAGCTATGCTATAATCAATTGAAGGGAAGCATACCAACTCAGCTTGGTGGTTTGAAGAAGCTTAGTGTTCTTGCCCTGCAGTCAAATCAATTAACTGGTGCTATCCCAGCTAGCCTAGGCAACTTGGGAATGTTAACGAGGCTGGACCTGAGCTCTAATGGCCTATTCGGTTCCATCCCCTCAAAATTAGCCGATGCCCCGTCTCTGCAAGTTCTTGATGTTCGCAACAATACTCTCTCTGGGAATGTGCCGCCTGTTCTGAAGAGGCTTGAAGATAAATTCTTGTATGAATACAATCTGGGATTATGTGGAACTGGGTTTTCATCCCTGAAGACTTGCACTGAAACTGATCATGTTGATCCTAGTAAGCCTGATCAACCGTATGGAGCTGGTATTAACGGTCACCCGACAAGGGACATTCCAGAAACTGCAAATGTTCGGTTGCCCTGCGATGGAACTCGGTGCCAGAAGTCATCGAAATCGAAACAGACAACATCTGTAACTGTTGGCATAGTTGTGATTGCCATAGCAGTGTCAGCAGTTGGCGTTCTAACCTTTGTACATTATCGTCGGAGAAAACAGAAGCTTGGAAACTCCTATGATGTCTCTGACAGCCGTCTAAGTACTGATCAAGCTAAGGCTATCACATACAGAAAAAATGGTTCTCCTCTAATCAGCCTTGAGTACTCCAATGGATGGGACCCTTTGGCTGATAGCAGGAACTTCAATGGGGATAGCCAAGACATGTTCCAAAGTTTCAGGTTCAACCTGGAAGAGGTCGAAACTGCAACTCAATATTTCTCAGACTCAAATCTGTTAGGTAAGAGTAACTTCAGTGCAACTTATAAAGGAGTGTTAAGAGACGGGTCTGTAGTTGCAGTGAAGAGCATCAGCAAAAGTAGCTGCAAGTCTGATGAAGCCGAGTTTCTGAAGGGATTGAACATTTTGACATCACTTAGGAATGAGAATCTAGTGAGGCTCAGGGGTTTTTGTTGTTCTAGGGGACGAGGCGAATGCTTTCTTGTTTATGATTTTGTTCCTAATGGAAATCTTTCCCGATACCTCGATGTAAAAGAAGGTGATGGAGAAGTCCTTGAATGGTCAACCAGAGTTTCCATTGTGAAAGGGATTGCTAAAGGTATTGCACATTTACATGCACACAAAGCCAACAAACCTGCTCTTGTTCACCAAAACATCTCAGCTGAGAAAGTGCTCATTGATCAGAGATTCAGTCCATTGCTTTTGGATTCCGGCCTCTGCAAGATTCTCACCAATGACATTGTCTTTTCGGCGCTCAAGGCTAGCGCGGCAAAGGGCTATCTAGCTCCGGAGTACACAACCACTGGCCGGTTCACTGAGAAAAGTGATGTGTATGCTTTTGGGGTGCTTCTATTCCAGATCCTCTCTGGAAAGCGGAAGATCACAAACACAATGCGCCTCTTAGCAGAATCGTCAAGGTTCTTAGAAGTTATGGACCCAAATCTGCATGGCAAGTTCTTTGAATTCGAGGCGGCTAAATTGTTGAAGATGGCTCTGGTTTGCTCCCACGAGTCTCCTTTTGAGAGGCCATCCATGGAAGCTATTGTTCAAGAACTGAGCAAGTGTAGTAGCTGTCTGTGA 2055 0.4574 MGFSALVLLFSLLFFLSHPARVCGNAELRALMDMKAALDPESRFLSSWTSHGNPCGGSFEGVACNEKGQVANISLQGKGLSGKLSPAIDGLKHLTGLYLHYNSLYGEIPKEIANLAELSDLYLNVNHFTGEIPTEIGNMENLQVLQLCYNQLKGSIPTQLGGLKKLSVLALQSNQLTGAIPASLGNLGMLTRLDLSSNGLFGSIPSKLADAPSLQVLDVRNNTLSGNVPPVLKRLEDKFLYEYNLGLCGTGFSSLKTCTETDHVDPSKPDQPYGAGINGHPTRDIPETANVRLPCDGTRCQKSSKSKQTTSVTVGIVVIAIAVSAVGVLTFVHYRRRKQKLGNSYDVSDSRLSTDQAKAITYRKNGSPLISLEYSNGWDPLADSRNFNGDSQDMFQSFRFNLEEVETATQYFSDSNLLGKSNFSATYKGVLRDGSVVAVKSISKSSCKSDEAEFLKGLNILTSLRNENLVRLRGFCCSRGRGECFLVYDFVPNGNLSRYLDVKEGDGEVLEWSTRVSIVKGIAKGIAHLHAHKANKPALVHQNISAEKVLIDQRFSPLLLDSGLCKILTNDIVFSALKASAAKGYLAPEYTTTGRFTEKSDVYAFGVLLFQILSGKRKITNTMRLLAESSRFLEVMDPNLHGKFFEFEAAKLLKMALVCSHESPFERPSMEAIVQELSKCSSCL 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2799g00013 684 SUPERFAMILY L domain-like 23 234 - -
Pral2799g00013 684 Gene3D Phosphorylase Kinase; domain 1 382 490 - -
Pral2799g00013 684 FunFam Leucine-rich repeat receptor-like kinase 26 135 - -
Pral2799g00013 684 Gene3D Transferase(Phosphotransferase) domain 1 491 683 - -
Pral2799g00013 684 Pfam Protein tyrosine and serine/threonine kinase 416 677 IPR001245 GO:0004672|GO:0006468
Pral2799g00013 684 Gene3D Ribonuclease Inhibitor 21 267 IPR032675 -
Pral2799g00013 684 FunFam Protein NSP-INTERACTING KINASE 2 137 259 - -
Pral2799g00013 684 ProSiteProfiles Protein kinase domain profile. 412 684 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2799g00013 684 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 72 679 - -
Pral2799g00013 684 Pfam Leucine rich repeat N-terminal domain 25 65 IPR013210 -
Pral2799g00013 684 FunFam Protein NSP-INTERACTING KINASE 2 383 490 - -
Pral2799g00013 684 SUPERFAMILY Protein kinase-like (PK-like) 388 678 IPR011009 -
Pral2799g00013 684 Pfam Leucine rich repeat 141 200 IPR001611 GO:0005515
Pral2799g00013 684 FunFam Protein NSP-INTERACTING KINASE 2 491 681 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2799g00013 Pral-Chr2799 163732 167717 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2799g00013 7 525 Miscellaneous Gene Families AT4G22730 55.408 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pral2799g00013 PK_Tyr_Ser-Thr 1.5e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2799g00013 - - gmx:100789253 1078.16