Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2799g00006 ATGGAAGAAAAAGATAGTTTTTTCGCTGGGCTCACCGTGAAGGCTAACGATGCTCCGGAAAGCCACCATGTAACTCCGAGCAGTGAAAACTATGGACTGTTTGGCGGGTCCACAGGTGCATCGCCGGCCCCCGCCCCCGCGCCGGCGCCGGCCACTGCACCAGCTCCGATTACGGCTCCAACTTCATCTCCAGCTTCAGCTCCGTTGCCAGCTTCAGTTTCGGCGCCAGAGCCAGTCAGCGTGGCGGCGGCGACGGGGAGTACGGATGTAGTAAAGAAGAAAAGGGGAAGGCCTAGGAAGTACGGACCTGATGGTAAATTAGCGTTGGCGTTGTCGCCGATGCCGATTTCATCTTCAATTCCGTTGACTGGGGACTTCTCAATGTGGAAACGGGGTAGAGGGCGGCCTATCGAATCGGTCAAGAAGTCGTTTAAGTGCGATATTGAAAGCCCTGGACCAGGTGATGGGATTGCATACTCAGTTGGTGCCAATTTCACACCTCATGTGCTTACTGTTAATGCTGGCGAGGATGTTAATATGAAGGTCATGTCCTTCTCTCAACAAGGATCTCGCGCTATTTGTATTCTTTCTGCAAATGGAACAATCTCTAATGTTACACTGCGCCAACCAACTTCTTCTGGGGGTACCTTGACATACGAGGGGCGATTTGAGATTCTTTCTTTATCTGGTTCATATATGCCTTCTGAGAACGGTGTGACAAGAAGTAGATCTGGTGGGATGAGTGTCTCTTTGGCTGGTCCAGATGGGCGAGTTGTGGGAGGCGGCCTTGCTGGTCTGTTGGTAGCAGCAGGTCCTGTGCAGGTTGTTGTGGGCAGTTTTCTTCCAGGCCACCAGCAGATGCAGAAACCCAAGAAACAAAAGACGAATCATTTTTCACCTGTTGCATCTGGACATTATAATCCCATCCCAGTTGATGAAATAAAAATCAGTTTCGGAGGAGTAAAGCCTATTATGACTCCTGCTGCATTTCAAGCAGACAACAACACCGCTTCTTTTAACAACGGCCAGGGCTCTAGCAACTCATCTGCTGATGATGCTGATGCTGATGATGATGATTTAACACTTTATCCTGAAAAGGACTCTAACCCCAGCCAAACAACAAATGCTGGAGTTGCATGCTAA 1143 0.4978 MEEKDSFFAGLTVKANDAPESHHVTPSSENYGLFGGSTGASPAPAPAPAPATAPAPITAPTSSPASAPLPASVSAPEPVSVAAATGSTDVVKKKRGRPRKYGPDGKLALALSPMPISSSIPLTGDFSMWKRGRGRPIESVKKSFKCDIESPGPGDGIAYSVGANFTPHVLTVNAGEDVNMKVMSFSQQGSRAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLSGSYMPSENGVTRSRSGGMSVSLAGPDGRVVGGGLAGLLVAAGPVQVVVGSFLPGHQQMQKPKKQKTNHFSPVASGHYNPIPVDEIKISFGGVKPIMTPAAFQADNNTASFNNGQGSSNSSADDADADDDDLTLYPEKDSNPSQTTNAGVAC 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2799g00006 380 MobiDBLite consensus disorder prediction 1 106 - -
Pral2799g00006 380 MobiDBLite consensus disorder prediction 21 35 - -
Pral2799g00006 380 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 59 351 IPR039605 GO:0003680
Pral2799g00006 380 MobiDBLite consensus disorder prediction 365 380 - -
Pral2799g00006 380 MobiDBLite consensus disorder prediction 43 63 - -
Pral2799g00006 380 FunFam AT-hook motif nuclear-localized protein 1-like 167 298 - -
Pral2799g00006 380 CDD DUF296 166 280 IPR005175 -
Pral2799g00006 380 SUPERFAMILY AF0104/ALDC/Ptd012-like 164 286 - -
Pral2799g00006 380 MobiDBLite consensus disorder prediction 335 380 - -
Pral2799g00006 380 Pfam Plants and Prokaryotes Conserved (PCC) domain 167 280 IPR005175 -
Pral2799g00006 380 MobiDBLite consensus disorder prediction 335 350 - -
Pral2799g00006 380 Gene3D - 167 298 - -
Pral2799g00006 380 ProSiteProfiles PPC domain profile profile. 162 301 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2799g00006 Pral-Chr2799 75903 80343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2799g00006 74 328 AT-hook Motif Nuclear Localized (AHL) Family AT4G25320 59.023 1.82e-91 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2799g00006 - - pcin:129313186 521.931