LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2794g00001	ATGCAGCCACCACTACTGCAACAAAAGCATCTGTTGTTCTTCTTATTGAACATCATAACCTGGTCATGGTTGACTCTGGACGGCGTCGTTTCGGACCCTCAGGCCAATCTAGTGCGACTATGGTGTGACCAAGACGGCGACGGCGACGGATCCATCTATTGGACAAAGAACGACGGGTCCATCTTGAAGGGGATCCTAGACGAAACGCTTCAAGACCTGAGAGCTCAGATCCAAAACCAAAACCAACACTTCACTACAGCTCAGGCAGTGAAGGCTAACATCCCCATTTATGGTCTTTTTCAGTGCAGAAACTACCTCTCCATCGCCGACTGCCTCGCTTGTTTCGATGTCGCCGCCGTCAACATCCGCAACTGCTCCACCACGGCATATGGTGCCCGTCTCGTCTACGAAGGCTGCTTCCTCAGGTACGACAGCAGCAAACATTTTGATCTGGCCAGCGAAGTCGAGTGGAGCGACATAAGATGTGGGAATCATACAATAATAGATTCCTCTGCGCTTGCTTCAACTGTACAACAAGTGTTGAGGAATCTAGACGTAGCAACCCCAAGAATGAGTGGATTTTATGCAGCCACTAAGACGCCTGTTCCTAATAGTAATGGTTTGAATGTTTATGCGATTGCTCAATGTGTTCAGACCCTCTCACAAAGTGGGTGCCAGAATTGCATGAAATCTGTATCAGAAAAATTTCAGACTTGTCTTACAAACTCAAATGCTGAGAGTTACGATACTGGCTGTTTCATGAGATACTCCACAGCTTCTTTCTTTGCTGGTAATCAAACCACTGATATCAACCACTTCTTGAAACAAGCTGGTTCAAGCAATAAGGGAGCCATCATTGGTATTGTTATTGGAAGTCTAGTGCTGGTTTTGATCTTCCTTATGACATTATTTGCCTGGATTAGACCACGAAGAAGCCAAAGAGAGTTCCCAAAGGTAAAACAACTTGAAAGAGATGTAACTGGAATAAGTAAGTTGAAAGCCCCAGTTAACTACAATTATAGGGATTTGAAGTCTGCAACAAAAAATTTCAGCATTGAAAATAAACTTGGGGAAGGTGGATTTGGAGCAGTATATAAGGGAACTTTGGAGAATGGAAAAGTAGTTGCAGTGAAGAAATTAACTTTACGACAATCAAAGAGGATGGAGGAAGAATTTGAGAGTGAAGTAAAGCTCATTAGCAATGTTCATCATCGGAATCTTGTTCGACTTCTTGGATGTTGCTGTAAAGGCGATGAGAGAATTTTGGTCTATGAATACATGGAAAAGACCAGTCTTGACAAATTCATATTTGGCAAAAAGAAAGGTTCACTTAATTGGAACCATCGATGGGATATAATTTTAGGAACAGCAAGGGGTTTAACTTATCTACATGAAGAATTTCATGTTTGCATTATACATAGAGATATAAAGACTAACAACATCCTATTAGATGATGATTTGCAACCTAAAATTGCTGATTTTGGTTTAGCAAAGCTCTTACCCGAAGACAAATCTCATCTTAGCACAAGATTTGCAGGAACATTAGGATATGCAGCACCAGAATATGCAATTCATGGACAATTATCAGAGAAGGTTGATATTTATAGCTACGGTGTTGTGGTGCTAGAAATTATTAGTGGTAAAAGAAACAGTGAATTAAAGCTCGATGGTGATGAGGAAGGCGAATTTCTCCTTCAGAAAGCTTGGAACTTATATAGGAAAGGCTTACATTTAAAGTTGATTGATGATACCTTAGACCCCAATGATTATGATGCAGAGGAAGTGAAGAAAATCATAAAGATTGCCTTACTTTGCACACAAGCATCTGCGGAATTAAGGCCAAAAATGTCTGAAGTAGTTGCTTTGCTCCAACAAGAATGTTTATCAGAGGATATAAGACCCACTATGCCTATTTTGATTGAAATTAAGTAG	1932	0.4084	MQPPLLQQKHLLFFLLNIITWSWLTLDGVVSDPQANLVRLWCDQDGDGDGSIYWTKNDGSILKGILDETLQDLRAQIQNQNQHFTTAQAVKANIPIYGLFQCRNYLSIADCLACFDVAAVNIRNCSTTAYGARLVYEGCFLRYDSSKHFDLASEVEWSDIRCGNHTIIDSSALASTVQQVLRNLDVATPRMSGFYAATKTPVPNSNGLNVYAIAQCVQTLSQSGCQNCMKSVSEKFQTCLTNSNAESYDTGCFMRYSTASFFAGNQTTDINHFLKQAGSSNKGAIIGIVIGSLVLVLIFLMTLFAWIRPRRSQREFPKVKQLERDVTGISKLKAPVNYNYRDLKSATKNFSIENKLGEGGFGAVYKGTLENGKVVAVKKLTLRQSKRMEEEFESEVKLISNVHHRNLVRLLGCCCKGDERILVYEYMEKTSLDKFIFGKKKGSLNWNHRWDIILGTARGLTYLHEEFHVCIIHRDIKTNNILLDDDLQPKIADFGLAKLLPEDKSHLSTRFAGTLGYAAPEYAIHGQLSEKVDIYSYGVVVLEIISGKRNSELKLDGDEEGEFLLQKAWNLYRKGLHLKLIDDTLDPNDYDAEEVKKIIKIALLCTQASAELRPKMSEVVALLQQECLSEDIRPTMPILIEIK	643

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2794g00001	643	PANTHER	CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3	98	637	-	-
	Pral2794g00001	643	FunFam	Cysteine-rich receptor-like protein kinase 2	427	631	-	-
	Pral2794g00001	643	FunFam	Cysteine-rich receptor-like protein kinase 2	318	426	-	-
	Pral2794g00001	643	Pfam	Salt stress response/antifungal	65	145	IPR002902	-
	Pral2794g00001	643	Pfam	Salt stress response/antifungal	169	258	IPR002902	-
	Pral2794g00001	643	Pfam	Protein kinase domain	351	567	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2794g00001	643	SUPERFAMILY	Protein kinase-like (PK-like)	333	623	IPR011009	-
	Pral2794g00001	643	SMART	serkin_6	350	628	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2794g00001	643	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	471	483	IPR008271	GO:0004672\|GO:0006468
	Pral2794g00001	643	CDD	STKc_IRAK	356	625	-	-
	Pral2794g00001	643	ProSiteProfiles	Protein kinase domain profile.	350	628	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral2794g00001	643	ProSiteProfiles	Gnk2-homologous domain profile.	44	148	IPR002902	-
	Pral2794g00001	643	Gene3D	Transferase(Phosphotransferase) domain 1	427	633	-	-
	Pral2794g00001	643	Gene3D	-	156	261	IPR038408	-
	Pral2794g00001	643	Gene3D	-	55	148	IPR038408	-
	Pral2794g00001	643	ProSiteProfiles	Gnk2-homologous domain profile.	155	261	IPR002902	-
	Pral2794g00001	643	ProSitePatterns	Protein kinases ATP-binding region signature.	356	379	IPR017441	GO:0005524
	Pral2794g00001	643	Gene3D	Phosphorylase Kinase; domain 1	313	426	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2794g00001	Pral-Chr2794	48758	52997	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2794g00001	11	634	Receptor kinase-like Gene Family	AT1G70520	36.478	2.19e-117	362

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_DLSV	Pral2794g00001		Pkinase	4.8e-51	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral2794g00001	-		-	gmx:100813585	726.472