Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2792g00005 ATGTCTCAAGACAGTTCAGATACTTCTTCGGCTTGCTGCTCAAGATCGGATCATTTGGATTCAGCTTCTGCTGAGCTCAAGCTTTACCGAGCCTTCATTTTCTCTGTACCCATCTTCTTCACTTTCATCCTGCTCTTTCTGTTCTACGTGTTCTACCTTCGACCTCGTCGGGTTGATTGGTCGTCTCTAAGGATGAGAGCGTTTGCGGCTGCCGAGGATAATGACGGTAACTCCAGGCAGTCTGAATTGGGTTTGAAGAAAGAACTGAGAGAGATGCTGCCGATTATCGTTTACAAAGAAAGCTTCTCAGTTAAAGATACACAATGCTCAGTTTGCCTTTTGGACTACCAACCAGAAGACAAGCTTCAACAGATACCTGCATGCGGCCATACATTTCACATGAGCTGCATTGATCTTTGGCTCACCAACCACAGCACCTGCCCTCTCTGTCGCTTGTCCCTTTTAGCTTCTGCTAAATCTTCAACTGAGACATCTAATTTACAGAGACCATCTAGCAATGAAGAAACACCAACTGCACAATTCTCTGAATCAAGATCTACAACTCATCCAGATAATAGTGTTGCCCAAAGTTGCTCTAGAGATAATGCAGGCAGTGCCCACTGTATTGATATTGAAAGAGGAAATGGAGAAACCAGTTAG 660 0.4439 MSQDSSDTSSACCSRSDHLDSASAELKLYRAFIFSVPIFFTFILLFLFYVFYLRPRRVDWSSLRMRAFAAAEDNDGNSRQSELGLKKELREMLPIIVYKESFSVKDTQCSVCLLDYQPEDKLQQIPACGHTFHMSCIDLWLTNHSTCPLCRLSLLASAKSSTETSNLQRPSSNEETPTAQFSESRSTTHPDNSVAQSCSRDNAGSAHCIDIERGNGETS 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2792g00005 219 MobiDBLite consensus disorder prediction 162 203 - -
Pral2792g00005 219 CDD RING-H2_EL5-like 108 151 - -
Pral2792g00005 219 PANTHER OS11G0150450 PROTEIN 40 190 - -
Pral2792g00005 219 SMART ring_2 109 150 IPR001841 -
Pral2792g00005 219 Pfam Ring finger domain 108 151 IPR001841 -
Pral2792g00005 219 FunFam RING-H2 finger protein ATL7 75 156 - -
Pral2792g00005 219 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 70 157 IPR013083 -
Pral2792g00005 219 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Pral2792g00005 219 SUPERFAMILY RING/U-box 93 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2792g00005 Pral-Chr2792 65224 69141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2792g00005 21 215 C3H Transcription Factor Family AT4G10150 52.020 1.88e-65 200