Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2789g00003 ATGAAAAACGGCAAGGGGAAGGGAGCAGCTGATGATCGGATGGTTGGCAAGCGAAAGGCCGCTCTAAAGCCTGACAAGAGCAGGGCAAAAATGTCCAAGAAGGCGAGGAATGCCAAGAAAGATCCCAACAAACCAAAAAGACCGCCCAGTGCTTTTTTTGTCTTCCTTGAGGAGTTCAGAAAGACCTTTAAGGCAGAAAATCCTAATGTGAAGGCTGTATCAGCTGTGGGGAAGGCTGGAGGAGAGAAATGGAAATCTCTGACTACTGCTGAGAAAGCTCCATATGAAGCCAAGGCTGCAAAAAAGAAAGCTGAGTATGAAAAACTCATGAATGCATATAATAAAAAGCAGACAAACTTAGTCAATGACAGAGATGAGGAATCGGATAAGTCCCAGTCTGAAGTGCATGATGAAGAGGATGAAGCCAGTGGAGAGGAAGCACACCAAGAAGAGGAGGATGAAGAGGAGAACGATGAAGACGACGATGATGAAGAGGATGACTGA 504 0.4563 MKNGKGKGAADDRMVGKRKAALKPDKSRAKMSKKARNAKKDPNKPKRPPSAFFVFLEEFRKTFKAENPNVKAVSAVGKAGGEKWKSLTTAEKAPYEAKAAKKKAEYEKLMNAYNKKQTNLVNDRDEESDKSQSEVHDEEDEASGEEAHQEEEDEEENDEDDDDEEDD 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2789g00003 167 MobiDBLite consensus disorder prediction 1 49 - -
Pral2789g00003 167 Pfam HMG (high mobility group) box 45 114 IPR009071 -
Pral2789g00003 167 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 45 114 IPR009071 -
Pral2789g00003 167 SUPERFAMILY HMG-box 38 119 IPR036910 -
Pral2789g00003 167 MobiDBLite consensus disorder prediction 115 167 - -
Pral2789g00003 167 MobiDBLite consensus disorder prediction 138 167 - -
Pral2789g00003 167 Coils Coil 96 119 - -
Pral2789g00003 167 SMART hmgende2 44 115 IPR009071 -
Pral2789g00003 167 MobiDBLite consensus disorder prediction 77 102 - -
Pral2789g00003 167 MobiDBLite consensus disorder prediction 119 137 - -
Pral2789g00003 167 Gene3D High mobility group box domain 28 128 IPR036910 -
Pral2789g00003 167 MobiDBLite consensus disorder prediction 1 28 - -
Pral2789g00003 167 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 152 IPR031061 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2789g00003 Pral-Chr2789 11992 15018 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Pral2789g00003 HMG_box 2.7e-24 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2789g00003 K25507 - aew:130794744 181.8