Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2787g00021 ATGACGCAGTTCACACCAACACTGCCACCTTTGCACCAAATAACACCCCTTTCCAACTCCATCAGTAATAACAACAACATTCAAGTTCCTAGGACGACCAATTTGTGGCCAAAATTCCAACAATCGAAGGCACTAGGAAGATTGGGCGATGCTAATTGCATGGAACAGTTGCTTATTCACTGTGCCGACGCCATCGAGGCCAATGACGTCACTCTTGCCCAACAAATCCTCTGGGTTCTCAATAACATCGCACCTCCCGACGGCGACTCCAACCAGCGTCTCGCCGCCACATTCCTGCGTGCCCTCGCCGCACGCGCCGCCAAATCTGGAAGCTCCAAAATGTTAGCCGCCGTCGCTAGCGCTCACAGCAACACCAGTCTCGCCATCCGAACCCACCGCTTCTCCCTCATCGAGCTCGCCAACTTCGTCGACGTCACCCCCTGGCATCGCTTCGGCTTCACAGCAGCTAATTCGGCCATTCTAGAAGCCACGGAAGGTTTCTCCACCATCCACATCGTTGACCTGAGCTCAACACACTGCATGCAGATTCCCACCTTAATCGACGCCATCGCTTCCCGCCATGACGTCCCTCCTCTGATAAAGCTCACAGTAGTGGGTGCTTCAAGAAACATCCCGCCTATGCTTGACATTTCCTACGACGAACTGGGTTCAAAGCTGGTCAATTTCGCAAAGTCTAAAAACGTCATGATGGATTTTAGAGTGGTTTCATCGACTCACGCAGACGGGTTCGCTGCTTTGATCCAATACCTTGGGTTGCACCACCTTCAGGTGACGGAAGCTTTGGTGATAAACTGTCACATGATGCTCCACTGGATTCCTGACGAAACCCTATCCGCTGCCTCTTCTTCATCCCTGAGATCACTGTTCCTGAAGGCACTGCGGAGTTTGAACCCAACGCTTGTCGTTTTGGTGGAGGAGGACGCAGATTTGACATCGAGCGATTTGGTGTGCAGGCTGAGGGCTGCGTTTAACTACATGTGGATACCGTACGACATGGTGGACGCGTTTGTTCAACAAGGGAGCAAGCAAAGGCAGTGGTACGAAGCGGACATATGTTGGAAGATAGAGAATGTGATAGCGCAAGAAGGGGCTGAGAGGGTAGAGAGGCTTGAGAGCAAGGGCAGGTGGGAGCAGCGAATGAGAGATGCTGGGTTTCAGGGGGTTAGCTTCAGCGACGACACCGTTTCGGAGGTGAAGGCCATGCTGGACGAACATGCAGCGGCGTGGGGGTTCAAGAAGCAAGACCAACATCTTCTGCTGACGTGGAAAGGACATAATGTCGTATTTGCCTCTGCTTGGTTTCCTGCTCGAACCTTGTTCTCCCTCTCTACTTTAACCCATTAA 1365 0.5231 MTQFTPTLPPLHQITPLSNSISNNNNIQVPRTTNLWPKFQQSKALGRLGDANCMEQLLIHCADAIEANDVTLAQQILWVLNNIAPPDGDSNQRLAATFLRALAARAAKSGSSKMLAAVASAHSNTSLAIRTHRFSLIELANFVDVTPWHRFGFTAANSAILEATEGFSTIHIVDLSSTHCMQIPTLIDAIASRHDVPPLIKLTVVGASRNIPPMLDISYDELGSKLVNFAKSKNVMMDFRVVSSTHADGFAALIQYLGLHHLQVTEALVINCHMMLHWIPDETLSAASSSSLRSLFLKALRSLNPTLVVLVEEDADLTSSDLVCRLRAAFNYMWIPYDMVDAFVQQGSKQRQWYEADICWKIENVIAQEGAERVERLESKGRWEQRMRDAGFQGVSFSDDTVSEVKAMLDEHAAAWGFKKQDQHLLLTWKGHNVVFASAWFPARTLFSLSTLTH 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2787g00021 454 Pfam GRAS domain family 54 440 IPR005202 -
Pral2787g00021 454 MobiDBLite consensus disorder prediction 1 23 - -
Pral2787g00021 454 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 53 431 IPR005202 -
Pral2787g00021 454 ProSiteProfiles GRAS family profile. 45 441 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2787g00021 Pral-Chr2787 218612 219976 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2787g00021 38 442 GRAS Transcription Factor Family AT3G49950 60.784 1.66e-180 508
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral2787g00021 GRAS 1.9e-97 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2787g00021 - - pcin:129296651 751.125