Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2786g00001 ATGGATAGCACCGATTCATCTTCAGGGTGTCAGCATCCTCAGCTTCCTCCTGGTTTCCGATTCCATCCCACCGACGAAGAGCTCGTCGTTCACTACCTCAAGCGAAAAGCCGCCTCTGCTCCGCTTCCCGTCGCCATCATTGCCGACGTCGATCTCTACAAGTTCGATCCCTGGGAGCTTCCCGGTAAGGCGGCGTTTGGGGAGCAAGAGTGGTACTTCTTCAGCCCGAGAGATCGGAAGTATCCAAATGGAGCGAGGCCAAACAGGGCAGCCACTTCGGGGTATTGGAAGGCCACCGGAACGGACAAGCCGATATTGTCGTCGGACGGACGAAACCAGAAAGTCGGGGTGAAGAAAGCTCTGGTTTTCTACGGCGGGAAGCCTCCAAAAGGCGTTAAAACCAACTGGATCATGCATGAATATAGGCTCACCGACAACAATTCTTACAGGAATTCTACCCCTAAGCCTCCTCCTCTGCCTTCCGATCCTGCGTCACAATCGACCAAGAAAAACTCCTTAAGGCTTGACAATTGGGTTTTGTGTCGGATATACAAGAAAAACAACAGTAATATGAATACTAGTCTGCAGAGGCCGCCATTGATGGAGCAGGAGAGGGAGATTTGCATGGAGGCTATGCTTCCCACCATATCAAGTTTATCAATGGTTAATAATACTGCTAACGCCGCTCACCAAATCTCCAACCCTCCATTAGGACTCGAGAATGATGACACCTTGTTCGATGGAATTCTGGGCATCGGCGGTGGCGGCGGCGGCGGTGGTGATCCTCATGATAATCACCACTTGTTGTCGTCAAACTCATCAAAGGCCAATAGTTTCCCTCCTGTGAAACGACCCCTCCCATCGCCGTTTTGGAACGAGACCACGGCTGGGTCTCCGTCAGGGTCGTCTTCGTCAAGCAAGAGATTCCATGGCGATCTTAACAGAACTGGGGTGACTAGTACCACTACCTCAGCTGACGACAACAGTTCCTTCATTTCTCTGCTAAGCCAGCTTCCTCCTCAGAATACGGCGACGTTTCATCACCCAAATGCCCTTCTGGGCTCCGTCGGCGACGGTGTTTTGAGGCCGCAATTTCAACTCCCAAGCCTGAATTGGACCTCATAA 1125 0.5182 MDSTDSSSGCQHPQLPPGFRFHPTDEELVVHYLKRKAASAPLPVAIIADVDLYKFDPWELPGKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPILSSDGRNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLTDNNSYRNSTPKPPPLPSDPASQSTKKNSLRLDNWVLCRIYKKNNSNMNTSLQRPPLMEQEREICMEAMLPTISSLSMVNNTANAAHQISNPPLGLENDDTLFDGILGIGGGGGGGGDPHDNHHLLSSNSSKANSFPPVKRPLPSPFWNETTAGSPSGSSSSSKRFHGDLNRTGVTSTTTSADDNSSFISLLSQLPPQNTATFHHPNALLGSVGDGVLRPQFQLPSLNWTS 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2786g00001 374 MobiDBLite consensus disorder prediction 1 21 - -
Pral2786g00001 374 ProSiteProfiles NAC domain profile. 15 186 IPR003441 GO:0003677|GO:0006355
Pral2786g00001 374 MobiDBLite consensus disorder prediction 146 171 - -
Pral2786g00001 374 Pfam No apical meristem (NAM) protein 16 143 IPR003441 GO:0003677|GO:0006355
Pral2786g00001 374 FunFam NAC transcription factor 56 24 191 - -
Pral2786g00001 374 Gene3D NAC domain 24 191 IPR036093 GO:0003677|GO:0006355
Pral2786g00001 374 PANTHER NAC TRANSCRIPTION FACTOR 56 15 215 - -
Pral2786g00001 374 MobiDBLite consensus disorder prediction 256 326 - -
Pral2786g00001 374 MobiDBLite consensus disorder prediction 291 326 - -
Pral2786g00001 374 SUPERFAMILY NAC domain 9 186 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2786g00001 Pral-Chr2786 13825 15272 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2786g00001 5 374 NAC Transcription Factor Family AT1G61110 52.770 2.05e-107 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral2786g00001 NAM 2.9e-40 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2786g00001 - - qsa:O6P43_031801 464.536