LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral2779g00002	ATGAGGATTCAAGTTAAATGCATTTCATTATGTGGTTCGGCTTCCAAATCTAATTCGTTTTCCCATTCCTTCAAGGTAAGTGACTGGGACATGGGGAGGAAAGGGAGTTGGTTTTCTTCAGTGAGGAAAGTTCTCGGTCCTCAGTCCAAGAACGATCAGGACAAAAAGCAGAAGTCAGATGAAGTAGGATATGACAAACACAAGGAAGCAGCTTTGCCAAATGAAGAAGCACAATCTGTTGTTCCTCCTGCTATTCCATCCAAAGAAGATATTAAATCAACTGGAGCAGAGAATGAGCATAGCAATTATGCTTATTCTCTGGCTCTTGCCACTGCTGCAGCAGCAGAGGCTGCTGTTGCTGCTGCTCAGGCTGCAGCAGAGGTTGTCCGTCTTACTAGTGTGTCCCGCTACCATCTAAAGTCGAAGGAAGACATGGCAGCTATCAAGATTCAGACGGCATTTCGAGGATATCTGGCAAGAAGAGCATTGCGGGGCTTGAAAGGTTTGGTGAGGCTGAAGAGATTGATACAGGGGAAATCTGTTAAACGACAAGCAGCTTCTACCTTACGATGCATGCAGACCCTCACACGATTGCAGTCTCAGGTCCATGAGAGGAGGGCTAGAACGTCAGAGGAGAACCAAGCTCTTCAGTGGCAGCTGCAGCAGAAACACGAAAAAGAACTTGAGAAGTTGCAAGCTGCTACTGGTGAAGAATGGGATGATACAGCGCAATCAAAGGAGCAAATTGAAGCAAGACAGTCCAAAAGGCAAGAAGCTGCGGTTCGAAGGGAGAGAGCTCTGGCCTACGCATTTTCACGTCAGCAAAAGTGGAGGAACTCTTCAAAACCTGCAAATCCGACCACATTCACGGATCCAATCAACCCACACTGGGGTTGGAGCTGGCTAGATCGATGGGTTGTAACACAGCCAGGGGATATCCAAAGAGGTATGGTTCACAGTGGGCGTGCATCTGCAAAGAGCATGGCAAGCCAACCCTTGTCTGTTGGAGAAGTCACTAAACTGTACACTTCTCGCGGTCAAATCCATCACAGTAACAACAAGCCTTCTCCGGCTGGCCAACAAAAATCAAGCCGGCCCCCGAGTCATAGGTCGTCTTCAATCCCACTTCAGAAGGCCCCCTCTGTCTCATCTACTTCCAGCAGCAAAGTAAGGGCGCCAAGCCCAAAGACCGGTTCTTGGGGCCGTGATGATGACTTGAGGAGTGCAGTTAGTGCTCAGTCACAACGGTACCGAAGACATACTATTTCAGGTCCATCGTTCAGAGACGACGAAAGCTTTGCAAGTTCATCTGCCCTCTCTACTTGCACGGTTCCTACTAAGTCAGCTAAGGTCAAGTCCAGAATTGAGAGTCCATCAGGTAAAAATGGGACACCAGAGAAAGGATCCAATACGAAGAAGAGACTTTCCTTCACAGATTCCCCTGCTCGTTTGAGGAACCATTCTGGCCCTCTTAAGGTGGATCTTTTGGCTTCCAATAAGGATGCTGCTTCAGTCACTAAGAAGAAAGTTGCCAATAATGGTGGCAGGTAG	1551	0.481	MRIQVKCISLCGSASKSNSFSHSFKVSDWDMGRKGSWFSSVRKVLGPQSKNDQDKKQKSDEVGYDKHKEAALPNEEAQSVVPPAIPSKEDIKSTGAENEHSNYAYSLALATAAAAEAAVAAAQAAAEVVRLTSVSRYHLKSKEDMAAIKIQTAFRGYLARRALRGLKGLVRLKRLIQGKSVKRQAASTLRCMQTLTRLQSQVHERRARTSEENQALQWQLQQKHEKELEKLQAATGEEWDDTAQSKEQIEARQSKRQEAAVRRERALAYAFSRQQKWRNSSKPANPTTFTDPINPHWGWSWLDRWVVTQPGDIQRGMVHSGRASAKSMASQPLSVGEVTKLYTSRGQIHHSNNKPSPAGQQKSSRPPSHRSSSIPLQKAPSVSSTSSSKVRAPSPKTGSWGRDDDLRSAVSAQSQRYRRHTISGPSFRDDESFASSSALSTCTVPTKSAKVKSRIESPSGKNGTPEKGSNTKKRLSFTDSPARLRNHSGPLKVDLLASNKDAASVTKKKVANNGGR	516

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral2779g00002	516	MobiDBLite	consensus disorder prediction	347	516	-	-
	Pral2779g00002	516	Gene3D	iswi atpase	139	167	-	-
	Pral2779g00002	516	Pfam	IQ calmodulin-binding motif	145	164	IPR000048	GO:0005515
	Pral2779g00002	516	MobiDBLite	consensus disorder prediction	234	258	-	-
	Pral2779g00002	516	MobiDBLite	consensus disorder prediction	48	73	-	-
	Pral2779g00002	516	MobiDBLite	consensus disorder prediction	272	293	-	-
	Pral2779g00002	516	MobiDBLite	consensus disorder prediction	428	483	-	-
	Pral2779g00002	516	PANTHER	IQ-DOMAIN 5-RELATED	31	490	-	-
	Pral2779g00002	516	SMART	iq_5	142	164	IPR000048	GO:0005515
	Pral2779g00002	516	MobiDBLite	consensus disorder prediction	347	394	-	-
	Pral2779g00002	516	ProSiteProfiles	IQ motif profile.	143	171	IPR000048	GO:0005515
	Pral2779g00002	516	MobiDBLite	consensus disorder prediction	46	93	-	-
	Pral2779g00002	516	MobiDBLite	consensus disorder prediction	273	293	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral2779g00002	Pral-Chr2779	5153	8988	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral2779g00002	31	494	IQD Protein Family	AT5G03040	41.860	9.78e-98	301