Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2773g00004 GATGTTCTGTTGTATGAAGGGGACAGAGATTTTGAGCCACACAAGGGCATTGAATTTGATTCTCATGAAGCAGCTTATTCATTTTATCAAGAATATGCCAAATCTATGGGATTCACCACTTCAATAAAAAACAGCAGGCGTTCAAAGAAAACCAAAGAATTTATTGATGCCAAATTCGCATGCTCTAGATATGGATTTACTCCCGAGTCAGATAGTGGGAGCAGTCGAAGGCCAAGTGTAAAGAAGACAGATTGCAAAGCCTGCATGCATGTGAAGAGAAGGGCAGATGGAAAGTGGATAATTCATGAATTCATAAAGGAGCATAATCATGAACTTCTACCAGCTTTGGCATATCATTTTCGGATTCATAGAAATGTGAAGTTAGCTGAAAAGAATAACATTGATATATTGCATGCTGTTAGTGAACGTACCAGAAAGATGTACGTTGAAATGTCTAAGCAATCTAGTGGCTGCCATAACTTTGGGTCTCATCTCAGTGATGTAAATTATCAGTTTGAAAGAGGCCAACATCTGGCTTTGGACGAGGGAGATGCTCGTGTTATTCTTGAGTATTTTAAGCACATTCAAAAGGAGAATCCTAACTTCTTTTATGCTATTGATTTGAATGAAGAACAACGCTTGAGAAATTTGTTTTGGGTTGATGCAAAAAGTAGGAGTGATTATGTCAGTTTTAATGATGTAGTTTCGTTTGATACTTCTTACATCAAAAGCAATGATAAGTTTCCATTTGCTCCTTTTGTTGGAGTGAACCATCACTTTCAGCCCATATTGCTTGGATGTGCATTGGTTGCTGATGAGACCAAACCAACATTTGTTTGGTTGATGAAGACATGGACTAGAGCAATGGGTGGGCAAGCTCCTAAAGTCATAATCACAGATCAAGACAAAGCCTTGAAGGCATCAGCTGAAGAAGTCTTCCCAAATGCACGCCATTGCTTTTCTCTTTGGCACGTACTTGATAGGATACCTGAAAATCTTTCTATGGTGATAAAAAGGTATAAGAATTTCTTGCCGAAGTTCAACAAATGCATATTTAAGTCTTGGACAGATGAAGAGTTTGACATGAGGTGGTGGAAAATGGTCACTAGATTTGAACTCCAGGATGACGTATGGTTTCAGTCATTGTATGAAGACCGGAAAAAGTGGGTGCCTACTTATATGGGGGATACCTTTTTAGCTGGAATGTCTACTGCTCAACGCTCTGAAAGTATGAACTCTTTCTTTGACAAATACATTCATAAGAAAATTACTGTTAAAGAGTTTGTGAAACAGTATGGGACAATTCTTCAGAATAGGTATGAAGAGGAAGCTATTGCAGATTTTGATACATTGCACAAACAGCCAGCACTCAAGTCTCCTTCTCCTTGGGAAAAACAAATGTCAACTGTTTATACACATGCGATCTTCAAGAAATTCCAAGTTGAAGTCTTGGGTGTTGTTGGTTGTCATCCCAGGAGAGACGGTGGAGATGGAAGTATTGCAAAATTTGTAGTTCAAGATTGTGAGAAGGAGGAAGAGTTTTTGGTCACTTGGAACGAGATGAACTCAGAAGTTTCTTGCTTCTGTCGATTATTTGAATATAAAGGTTTCCTTTGCAGGCATGCGTTGAATGTTCTCCAGCTTTGTGGCTGTTCAAGTATTCCATCTCACTACATTTTAAAAAGGTGGACCAAAGATGCAAAAAGTAGGGTATCAATGGTAGATGGAACTGAAAGGATCCAAACTAGGGTGCAACGTTATAATGACTTGTGTAAAAAAGCTATTGAATTGAGTGAAGAAGGATCCTTATCTGAAGAGAGTTATGATGTTGTTTTCCGTGCACTTGTTGATGCCCTGAAAAATTGTGTGCATGTAAATAATTCTAACAACAATAATGCAGAAACCAGCAACAGTTCTCTTGCCCTGCGTGAAGCAGAAGAAAATCAGGTTAACATTGTGACAAAAACAACTAAAAAGAGGACACCAGCTAAGAGAAGAAAGGTACAAGTAGATACAGACATGATACTTGTCGAGGCACCAGACAGCCTGCAGCAAATGGATAACCTTAGCTCGGATGGAATGACCCTTAATGGATATTATGGTGCCCAGCAAAATGTCCAAGGACTGGTACAGTTGAACTTAATGGAGCCTCCTCATGATGGTTACTATGTCAATCAACAGAGTATGCAAGGCCTTGGTCAATTGAATTCTATGACCCCAGGCCACGATGGGTTTTTCGGGACACAGCAAAGCATTCATGGGCTGGGGCCATTGGAGTTTCGTCCACCAACCACTTTTGGATATACCCTGCAGGATGAGCCTGATCTGAGGTCTGCTCAGTTTCATGGCAGCAGTTCAAGAAATACATAG 2370 0.3983 DVLLYEGDRDFEPHKGIEFDSHEAAYSFYQEYAKSMGFTTSIKNSRRSKKTKEFIDAKFACSRYGFTPESDSGSSRRPSVKKTDCKACMHVKRRADGKWIIHEFIKEHNHELLPALAYHFRIHRNVKLAEKNNIDILHAVSERTRKMYVEMSKQSSGCHNFGSHLSDVNYQFERGQHLALDEGDARVILEYFKHIQKENPNFFYAIDLNEEQRLRNLFWVDAKSRSDYVSFNDVVSFDTSYIKSNDKFPFAPFVGVNHHFQPILLGCALVADETKPTFVWLMKTWTRAMGGQAPKVIITDQDKALKASAEEVFPNARHCFSLWHVLDRIPENLSMVIKRYKNFLPKFNKCIFKSWTDEEFDMRWWKMVTRFELQDDVWFQSLYEDRKKWVPTYMGDTFLAGMSTAQRSESMNSFFDKYIHKKITVKEFVKQYGTILQNRYEEEAIADFDTLHKQPALKSPSPWEKQMSTVYTHAIFKKFQVEVLGVVGCHPRRDGGDGSIAKFVVQDCEKEEEFLVTWNEMNSEVSCFCRLFEYKGFLCRHALNVLQLCGCSSIPSHYILKRWTKDAKSRVSMVDGTERIQTRVQRYNDLCKKAIELSEEGSLSEESYDVVFRALVDALKNCVHVNNSNNNNAETSNSSLALREAEENQVNIVTKTTKKRTPAKRRKVQVDTDMILVEAPDSLQQMDNLSSDGMTLNGYYGAQQNVQGLVQLNLMEPPHDGYYVNQQSMQGLGQLNSMTPGHDGFFGTQQSIHGLGPLEFRPPTTFGYTLQDEPDLRSAQFHGSSSRNT 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2773g00004 789 Pfam MULE transposase domain 234 326 IPR018289 -
Pral2773g00004 789 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 7 623 IPR031052 GO:0006355
Pral2773g00004 789 ProSiteProfiles Zinc finger SWIM-type profile. 514 550 IPR007527 GO:0008270
Pral2773g00004 789 SMART 26again6 525 552 IPR006564 GO:0008270
Pral2773g00004 789 Pfam SWIM zinc finger 523 549 IPR007527 GO:0008270
Pral2773g00004 789 Pfam FAR1 DNA-binding domain 27 114 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2773g00004 Pral-Chr2773 21619 25001 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral2773g00004 MULE 6.6e-23 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2773g00004 - - gmx:100805377 1347.8