Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2771g00024 ATGGTCGCGCGCAATAACCCCCAAACACCCCAAACTCCTCTTCCCAGATTGGCCGATGAAACCCATATGTCTGCTTTTCCTCCTCCGTCTTCACCGTCTCCTTCTTCATCTTCTTGTTCTTCATTTTACATGAAGAAAGATCCTCAAGAGGACGTCTTTCCCTTCTGGGTATCTGTCCTGATGACACTGGAAGCTTACACGCAAAGACAAAGACCAAACCCATCAACATCAGCTGCTGCAGCAAGACCCTGCACCATTCTCAGGGATACGAGGTTCATGGCCTTTCTCATGGTACCGTTAGTTCTGTCTTGCCTCGTTGTCACTGTCTCCTCTTCTTGCACCCAATTGGATAAAGAGCCTCTCTTGGACTTCTCCAACGATATATCCACAGAACCTCACCCTCCTCTTAATTGGTCTTCTTCTGTTGATTGCTGCTCTTGGGAAGGCATTCTTTGCGGTGAGAGGAATATGAGTAATGGGGATCAGCGAGTTATTGGCTTATGGCTTCCATACAGAGGTCTTTCTGGTTCAATATCCCCTGCTCTCACGAAACTCACTGGTCTGTCTCAGCTCAATCTCTCCCACAATCGACTTTCTGGTAATCTCCCAATCCAATTCTTCTCGCTCCTTAATCACCTGCAGATTCTTGATTTAAGCTACAATCGTCTCTCTGATGAATTGCCGACCTCTGATATTAATAACAAAACCAGTAGTATTATCCAGGAGCTTGATTTGTCTAGCAACCTATTTCAAGGAACACTCCCTTCTTCTTTCATTCAGTACCTTGAAGCTGCTGCTGCAGCAGGGACTTTGACATCTTTTAATGTTAGTAACAATAGCTTCATAGGTTCAATTCCCACTTCTCAACTTTGCATTAGTGACAGTCTCAGATTCTTGGACCTTTCCTACAATAAATTTAACGGTTCAATTCAATTTGGATTGGGAGCATGTTCCAAGCTTGAGATTTTCCGAGCAGGTTTCAATTCTATCTCTGGGCCTCTTCCTGGTGCTCTTTTTGATGCCGTTTCCCTTAGAGAGATCTCCTTGCCCCTCAATCAACTCTCTGGAAATATTGATGAGGGCATCGCTAGCCTCACCAACCTCACAGTCCTGGAGCTCTACTCCAATGATTTCGGAGGATACATACCACGAGGTATGGGTAAGTTATCCAAACTGGAAAAGCTACTCCTTCATATAAACAATTTGACGGGTACTATACCTCCATCTCTGGTGAACTGTGTCAATCTTGTTGAGTTAAATTTAAGGGTCAACCTCTTGAAGGGGAATCTTGCGGAATTTAATTTCTCCGGATTCCAGCGGCTTATCACTCTTGATCTGGGCAACAATAATTTTACGGGCAATTTACCAACAACCCTTTATGCATGCAAATCACTGGCTGCAGTAAGGCTGGCATCTAATCAGCTTGAAGGACAGATCACTCCAGACATACTTGGACTCGAGTCTCTGTCTTTCCTATCAATATCTACCAACTCTCTAAGAAATTTCACAGGAGCTATGAGGATACTCTCAGGCCTCAAGAACCTTAGTAGCCTTGTCCTCTCAAAGAATTTTTATAATGAAACCATCCCGTATGATGAGAACTTGGTTGGCCGAGATGGATTCCAAAAACTCCAAGTGCTAGCCTTGGGTGGTTGTAATTTCACAGGTCAAATACCAGGATGGCTTGCAAGGCTTAGGATGCTCGAGGTCATTGATCTGTCCTATAATCTTATCACTGGTTCAATTCCTCCTTGGTTGGGTAAACTTCCACAGCTATTCTACATAGACTTGTCTCATAACCAACTTACAGGAGTATTTCCCACGGAACTCACAAGATTTCCAGCATTAACATCACAACAGGCAAATGATAGAATAGTAAGGTCTTACCTGGAGTTACCTGTCTTCATTGTGCCGAACAATGCTTCTCAGCAGCAGTATAATCAGCTTTCCAACCTACCACCAGCAATATATCTGAGAAACAATAGTCTGCGTGGCAATATTCCTGAGGAGATTGGCCTCTTGAAAGTCCTACATCAGTTGGATCTGGGTAATAACAACTTCTCTGGCAGTATTCCAGTTCAAATTTCTAACTTGACTAATTTAGAGAAGTTAGACCTCTCAGGAAACAGACTATCTGGTGAAATTCCTGCTTCACTTAAATGCCTGCATTTCTTGTCATTTTTCACTGTGGCAAACAATGATCTTCAAGGAGAGATACCAACAGGTGGCCAATTTGATACCTTCCCTCCTTCCAGTTTTGCAGGAAACTCACGATTGTGTGGTTCAGCTATACAACGTTCTTGCCCTAGTCTACAAGGTAACAATGCATCTCATCGCACTTCAAACAGAAAAATCATGATTGGACTTGTCATCGCAGTCTGTTTGGGCACTGTTTCTATCATGATTGTTTTGGTAATCTGGATACTTTCGAAGAGGAGGATCAATCCAGGGGGAGACCCGGACAAGATTGAACTGGAATCAATTTCTGCCTACTCCAATAGTGGTGTTCATCCTGAAGTTGATAAGGAGGCTAGTCTAGTGGTAATGTTCCCCAGCAAAACAAATGAAGTCAAAGATCTTAACATATTTGAGATCTTAAAAGCCACTGAAAATTTCAGTCAAGCAAACATAATAGGATGTGGGGGTTTTGGTTTGGTTTATAAAGCAACTTTACCTGATGGAACTAAGCTAGCTATCAAGAAACTTTCAGGAGATTTGGGGCTCATGGAAAGGGAATTTAAAGCAGAGGTGGAGGCTTTGTCAACAGCCCGACACGAGAATTTGGTTGCATTGCAAGGTTACTGTGTACATGATGGCTTTCGGCTTCTCATATATTCTTACATGGAAAATGGAAGTCTGGATTATTGGTTGCACGAGAAGCCTAATGGTGCAACTCAACTTGATTGGCCAACTCGACTGAAGATAGCACGAGGTGCGGGTTGTGGGTTGGCTTACATGCATCAGATATGTGAACCACACATTGTCCATCGTGACATAAAGTCAAGCAACATCCTCCTTAATGAGAAGTTTGAGGCACATGTTGCAGATTTTGGGTTGTCTCGGTTGATTCTTCCATATCACACTCATGTTACAACTGAACTTGTAGGTACATTAGGTTACATTCCCCCTGAGTATGGACAAGCATGGGTTGCCACTCTTAGGGGAGATGTGTACAGCTTTGGGGTCGTCATGCTTGAGCTGCTCACCGGGAGGAGACCTGTTGACATATGCAAGCCAAAAATGTCAAGGGAATTGGTTGGCTGGGTGCAACAAATGAGGAGTGAAGGAAAACAAGATGAAGTTTTCGACCCTCTTCTGAGAGGAAAGGGCTTTGAAGAGGAGATGCTGCAGGTACTTGACGTGGCCTGCATGTGTGTCAACCAGAATCCTTTCAAGAGGCCAAGCATCAAAGAAGTTGTTGAGTGGTTGAAGAATGTAGGATCAGCCAAACAACAACAGAATAAAGAGTAG 3471 0.435 MVARNNPQTPQTPLPRLADETHMSAFPPPSSPSPSSSSCSSFYMKKDPQEDVFPFWVSVLMTLEAYTQRQRPNPSTSAAAARPCTILRDTRFMAFLMVPLVLSCLVVTVSSSCTQLDKEPLLDFSNDISTEPHPPLNWSSSVDCCSWEGILCGERNMSNGDQRVIGLWLPYRGLSGSISPALTKLTGLSQLNLSHNRLSGNLPIQFFSLLNHLQILDLSYNRLSDELPTSDINNKTSSIIQELDLSSNLFQGTLPSSFIQYLEAAAAAGTLTSFNVSNNSFIGSIPTSQLCISDSLRFLDLSYNKFNGSIQFGLGACSKLEIFRAGFNSISGPLPGALFDAVSLREISLPLNQLSGNIDEGIASLTNLTVLELYSNDFGGYIPRGMGKLSKLEKLLLHINNLTGTIPPSLVNCVNLVELNLRVNLLKGNLAEFNFSGFQRLITLDLGNNNFTGNLPTTLYACKSLAAVRLASNQLEGQITPDILGLESLSFLSISTNSLRNFTGAMRILSGLKNLSSLVLSKNFYNETIPYDENLVGRDGFQKLQVLALGGCNFTGQIPGWLARLRMLEVIDLSYNLITGSIPPWLGKLPQLFYIDLSHNQLTGVFPTELTRFPALTSQQANDRIVRSYLELPVFIVPNNASQQQYNQLSNLPPAIYLRNNSLRGNIPEEIGLLKVLHQLDLGNNNFSGSIPVQISNLTNLEKLDLSGNRLSGEIPASLKCLHFLSFFTVANNDLQGEIPTGGQFDTFPPSSFAGNSRLCGSAIQRSCPSLQGNNASHRTSNRKIMIGLVIAVCLGTVSIMIVLVIWILSKRRINPGGDPDKIELESISAYSNSGVHPEVDKEASLVVMFPSKTNEVKDLNIFEILKATENFSQANIIGCGGFGLVYKATLPDGTKLAIKKLSGDLGLMEREFKAEVEALSTARHENLVALQGYCVHDGFRLLIYSYMENGSLDYWLHEKPNGATQLDWPTRLKIARGAGCGLAYMHQICEPHIVHRDIKSSNILLNEKFEAHVADFGLSRLILPYHTHVTTELVGTLGYIPPEYGQAWVATLRGDVYSFGVVMLELLTGRRPVDICKPKMSRELVGWVQQMRSEGKQDEVFDPLLRGKGFEEEMLQVLDVACMCVNQNPFKRPSIKEVVEWLKNVGSAKQQQNKE 1156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2771g00024 1156 MobiDBLite consensus disorder prediction 1 15 - -
Pral2771g00024 1156 FunFam Leucine-rich repeat receptor-like kinase 118 239 - -
Pral2771g00024 1156 Gene3D Transferase(Phosphotransferase) domain 1 948 1156 - -
Pral2771g00024 1156 Gene3D Ribonuclease Inhibitor 434 776 IPR032675 -
Pral2771g00024 1156 ProSitePatterns Protein kinases ATP-binding region signature. 878 901 IPR017441 GO:0005524
Pral2771g00024 1156 Gene3D Phosphorylase Kinase; domain 1 834 947 - -
Pral2771g00024 1156 FunFam Leucine-rich repeat receptor protein kinase MSP1 837 947 - -
Pral2771g00024 1156 SMART LRR_typ_2 674 697 IPR003591 -
Pral2771g00024 1156 SMART LRR_typ_2 698 721 IPR003591 -
Pral2771g00024 1156 SMART LRR_typ_2 210 234 IPR003591 -
Pral2771g00024 1156 SMART LRR_typ_2 389 413 IPR003591 -
Pral2771g00024 1156 SMART LRR_typ_2 565 589 IPR003591 -
Pral2771g00024 1156 SMART LRR_typ_2 185 209 IPR003591 -
Pral2771g00024 1156 SMART LRR_typ_2 365 388 IPR003591 -
Pral2771g00024 1156 SMART LRR_typ_2 438 462 IPR003591 -
Pral2771g00024 1156 Gene3D Ribonuclease Inhibitor 333 433 IPR032675 -
Pral2771g00024 1156 Pfam Protein kinase domain 873 1141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2771g00024 1156 Gene3D Ribonuclease Inhibitor 240 332 IPR032675 -
Pral2771g00024 1156 PRINTS Leucine-rich repeat signature 592 605 - -
Pral2771g00024 1156 PRINTS Leucine-rich repeat signature 698 711 - -
Pral2771g00024 1156 Pfam Leucine Rich repeat 211 226 IPR001611 GO:0005515
Pral2771g00024 1156 SMART serkin_6 872 1143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2771g00024 1156 Pfam Leucine rich repeat N-terminal domain 117 152 IPR013210 -
Pral2771g00024 1156 SUPERFAMILY L domain-like 645 755 - -
Pral2771g00024 1156 SUPERFAMILY Protein kinase-like (PK-like) 857 1143 IPR011009 -
Pral2771g00024 1156 SUPERFAMILY L domain-like 271 618 - -
Pral2771g00024 1156 FunFam Leucine-rich repeat receptor-like protein kinase 948 1154 - -
Pral2771g00024 1156 ProSiteProfiles Protein kinase domain profile. 872 1143 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2771g00024 1156 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 335 430 - -
Pral2771g00024 1156 Pfam Leucine Rich Repeat 700 721 IPR001611 GO:0005515
Pral2771g00024 1156 FunFam Tyrosine-sulfated glycopeptide receptor 1 435 773 - -
Pral2771g00024 1156 SUPERFAMILY L domain-like 113 337 - -
Pral2771g00024 1156 MobiDBLite consensus disorder prediction 1 42 - -
Pral2771g00024 1156 Gene3D Ribonuclease Inhibitor 116 239 IPR032675 -
Pral2771g00024 1156 ProSitePatterns Serine/Threonine protein kinases active-site signature. 994 1006 IPR008271 GO:0004672|GO:0006468
Pral2771g00024 1156 ProSiteProfiles Leucine-rich repeat profile. 700 722 IPR001611 GO:0005515
Pral2771g00024 1156 Pfam Leucine rich repeat 543 602 IPR001611 GO:0005515
Pral2771g00024 1156 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 343 1144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2771g00024 Pral-Chr2771 189053 192945 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2771g00024 81 770 Miscellaneous Gene Families AT1G17250 51.778 0.0 655
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Pral2771g00024 Pkinase 4.7e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2771g00024 - - pcin:129290895 1991.85