Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral2771g00021 ATGATGGAGGATCGGGGGCTTCTGCCGCTGGTGTTCATCAGCACCTGCATTCTGGGTTGGATGCTCATTGCTGTCAATGGGCAGACAGATCAAACTGATGTTGCCGCTTTGCAGGCTATGTTTACTGGTATGAACTCACCCTCCCGGCTAGGTTGGCAAGCAAATGGTGGTGATCCCTGTGGACAGCCTTGGAAAGGCATTACTTGCTCAGGCAATAGAGTTACAGAGATTAAGTTGCCTAATCTTGGATTATCCGGATCATTCGGTTACCAGTTACAAACCATGACATCTGTGACCACCCTAGATATGAGTCACAATAATTTTGTAGGTGCCGTACCATACCAACTTCCACCAAATTTGCAGAGATTAGATCTCTCCAATAACCAATTCACTGGGAGTTTGCCGTATTCGATTTCTGACATGGCTTCTCTTACATACCTAAATGTTGCTCACAATCAACTACAGAATGGACTGAGTGACACGTTTCAAAAGCTTTCTAAGCTAGCCACACTGGATCTCTCTTTCAATTCTCTGTCAGGCAGCCTTCCTCAGAGTTTCAGCTCACTTTCAAGCATGAACAACATGTATCTGCAAAACAACCAGTTTGCAGGGACTATTGATGTCCTCGCCAATCTGCCTCTTGATAGTCTGAATGTGCAGAACAACCGTTTTACAGGCTGGATACCAGAACAGCTGAAAAGCATTGACCTCCAGACATCAGGAAATACGTGGAACTCAGGTCCTGCCCCTCCTCCACCTCCTGGGACGCCCCCTGCAAGGAGAAGGAACCGGCATCACAACTCTGATGGAAGTAATAGCTCTTCAGATGGCACCAGCGGTGGGGAGAAAAAATCTGGTATAGGAGGCGGCGGTATTGCTGGAATAGTGATCTCCATCCTTCTTGTTGGGGCGGTAGTTGCTTTCTTTTTGGTGAAAAGAAGATCCAGGAAGTCATCTCCAGATATAGAAAAGCTCAACAGTGAGCCTTTTGCTCCTCTCAATTCAAACGTAGCGCATGAAGTGAAGTCTGTGCAACCTCCCTCTGTAGTTGACATGAAGACATTTGATACGTCCGCCTCAGTAAATATTAAACCCCCACCTATTGAACGTCACAAATCATTTGATGAAGATGAATTTTCCAAGAAGCCAATTATTGTCAAGAAAACTGTAAAAGCTCCAGCAAATGTGAAATCATATTCTATAGCAGATCTACAGATCGCCACTGGGAGCTTCAGTATGGATCACCTCCTTGGGGAGGGATCTTTTGGGCGTGTTTATCGGGCTCACTCTGATGATGGAAAGGTTCATGCTGTGAAGAAAATTGATTCATCTATCCTTCCCCATGATTCAGAAGATTTTATGGAAATAGTTTCAAACATCTCCAAGTTGCACCATCCAAATGTAACAGAGCTTGTTGGTTATTGTTCAGAGCATGGACAACACCTCCTAGTCTCTGAGTTTCATAAAAATGGATCGCTACATGACTTCCTTCACTTACCAGATGAATATAGCAAACCATTAATATGGAATTCCCGTGTCAAGATTGCTTTGGGGACTGCACGTGCTTTGGAGTACCTGCATGAAGTTTGTTCACCATCAGTTGTTCATAAGAATATTAAGTCGGCCAACATATTGCTTGATGCGGAGCTCAATCCTCATCTCTCGGACTCAGGATTGGCAAGCTATATTCCGAATGCTGACCAGGTCTTGAACCGTAATGCTGGATCTGGGTATGATGCACCTGAAGTTGCTTTGTCTGGTCAATATACTTTGAAGAGTGATGTTTACAGCTTTGGAGTTGTTATGTTGGAGCTTCTTAGTGGACGGAAACCATTTGAGAGCACAAGGCCAAGATCCGAGCAATCTCTGGTGCGGTGGGCAACACCTCAACTCCATGATATTGATGCATTGGCTAAAATGGTTGATCCTGCTCTGGAGGGGCTATACCCCGTTAAGTCCCTTTCTAGGTTTGCTGATGTCATTGCGCTGTGTGTTCAGCCGGAGCCTGAATTCCGACCACCTATGTCAGAGGTGGTTCAAGCATTGGTTCGCTTAGTGCAGCGAGCTAACATGAGCAAGAGGACATTTGGACCAGATCAAGGAGGATCCAATCGAGGAGGCGACGATCAAGACACACAAGATATGTAA 2148 0.4534 MMEDRGLLPLVFISTCILGWMLIAVNGQTDQTDVAALQAMFTGMNSPSRLGWQANGGDPCGQPWKGITCSGNRVTEIKLPNLGLSGSFGYQLQTMTSVTTLDMSHNNFVGAVPYQLPPNLQRLDLSNNQFTGSLPYSISDMASLTYLNVAHNQLQNGLSDTFQKLSKLATLDLSFNSLSGSLPQSFSSLSSMNNMYLQNNQFAGTIDVLANLPLDSLNVQNNRFTGWIPEQLKSIDLQTSGNTWNSGPAPPPPPGTPPARRRNRHHNSDGSNSSSDGTSGGEKKSGIGGGGIAGIVISILLVGAVVAFFLVKRRSRKSSPDIEKLNSEPFAPLNSNVAHEVKSVQPPSVVDMKTFDTSASVNIKPPPIERHKSFDEDEFSKKPIIVKKTVKAPANVKSYSIADLQIATGSFSMDHLLGEGSFGRVYRAHSDDGKVHAVKKIDSSILPHDSEDFMEIVSNISKLHHPNVTELVGYCSEHGQHLLVSEFHKNGSLHDFLHLPDEYSKPLIWNSRVKIALGTARALEYLHEVCSPSVVHKNIKSANILLDAELNPHLSDSGLASYIPNADQVLNRNAGSGYDAPEVALSGQYTLKSDVYSFGVVMLELLSGRKPFESTRPRSEQSLVRWATPQLHDIDALAKMVDPALEGLYPVKSLSRFADVIALCVQPEPEFRPPMSEVVQALVRLVQRANMSKRTFGPDQGGSNRGGDDQDTQDM 715
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral2771g00021 715 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 30 255 - -
Pral2771g00021 715 MobiDBLite consensus disorder prediction 238 285 - -
Pral2771g00021 715 MobiDBLite consensus disorder prediction 693 715 - -
Pral2771g00021 715 Gene3D Ribonuclease Inhibitor 30 251 IPR032675 -
Pral2771g00021 715 PRINTS Leucine-rich repeat signature 165 178 - -
Pral2771g00021 715 PRINTS Leucine-rich repeat signature 120 133 - -
Pral2771g00021 715 Pfam Protein tyrosine and serine/threonine kinase 413 682 IPR001245 GO:0004672|GO:0006468
Pral2771g00021 715 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 375 487 - -
Pral2771g00021 715 Pfam Leucine rich repeat 97 154 IPR001611 GO:0005515
Pral2771g00021 715 Pfam Leucine rich repeat 160 202 IPR001611 GO:0005515
Pral2771g00021 715 PANTHER LEUCINE RICH REPEAT KINASE 2 72 689 - -
Pral2771g00021 715 SUPERFAMILY Protein kinase-like (PK-like) 395 682 IPR011009 -
Pral2771g00021 715 Gene3D Transferase(Phosphotransferase) domain 1 489 700 - -
Pral2771g00021 715 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Pral2771g00021 715 ProSiteProfiles Protein kinase domain profile. 411 685 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral2771g00021 715 Gene3D Phosphorylase Kinase; domain 1 374 487 - -
Pral2771g00021 715 SMART LRR_typ_2 165 188 IPR003591 -
Pral2771g00021 715 SMART LRR_typ_2 118 140 IPR003591 -
Pral2771g00021 715 SMART LRR_typ_2 141 164 IPR003591 -
Pral2771g00021 715 ProSitePatterns Protein kinases ATP-binding region signature. 417 440 IPR017441 GO:0005524
Pral2771g00021 715 SUPERFAMILY L domain-like 29 232 - -
Pral2771g00021 715 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 488 696 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral2771g00021 Pral-Chr2771 108839 116662 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral2771g00021 1 714 Strubbelig Receptor Gene Family AT1G53730 65.470 0.0 861
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Pral2771g00021 PK_Tyr_Ser-Thr 8.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral2771g00021 - - gmx:100780323 1005.36